G477451


Basic Information

Item Value
gene id G477451
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 318366 ~ 318596 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547886
CAGATCTGCTGCCCTCAAAGCAACCTTCCTGACAGGACTTTTCCATTCACTCAGAATCCGTGCATGTCGAATCCTGACACTGTGAAGCCGAACAAACGCTTTTTACGATCTAAGGTTAAACTCTTCTTCTTCTGGGGCATGTCGCTATGAAATCAAAGCTAGCTGTCCATAAACACACTCTCTCACACACACAAAATCTGCTTGTGACTCACTAAAAGTCCTACATTAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547886 True 231 lncRNA 0.45 1 318366 318596

Neighbor

gene id symbol gene type direction distance location
CI01000335_00286459_00296460 NA coding upstream 21110 284727 ~ 297256 (+)
CI01000335_00193513_00197704 NA coding upstream 120602 191873 ~ 197764 (+)
CI01000335_00149953_00163006 TFEC coding upstream 154827 149953 ~ 163539 (+)
CI01000335_00103583_00132304 NA coding upstream 185937 103472 ~ 132429 (+)
CI01000335_00077557_00081374 CD5L coding upstream 236880 75813 ~ 81486 (+)
CI01000335_00489106_00492720 NA coding downstream 170092 488688 ~ 492973 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding downstream 208355 526951 ~ 537487 (+)
CI01000335_00586957_00597421 TMEM168A coding downstream 268361 586957 ~ 598108 (+)
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding downstream 362834 681430 ~ 741222 (+)
CI01000335_00884515_00888701 NA coding downstream 565742 884338 ~ 888831 (+)
G477438 NA non-coding upstream 27335 290807 ~ 291031 (+)
G477436 NA non-coding upstream 37237 280924 ~ 281129 (+)
G477435 NA non-coding upstream 38583 279568 ~ 279783 (+)
G477431 NA non-coding upstream 44416 273743 ~ 273950 (+)
G477430 NA non-coding upstream 64131 254021 ~ 254235 (+)
G477453 NA non-coding downstream 2259 320855 ~ 321097 (+)
G477454 NA non-coding downstream 3072 321668 ~ 321907 (+)
G477456 NA non-coding downstream 6166 324762 ~ 324963 (+)
G477457 NA non-coding downstream 6529 325125 ~ 325439 (+)
G477458 NA non-coding downstream 7263 325859 ~ 326080 (+)
G477502 NA other downstream 230926 549522 ~ 554633 (+)

Expression


Co-expression Network