G477453


Basic Information

Item Value
gene id G477453
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 320855 ~ 321097 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547888
CATTTGGAACATAGTCTGCTTAAGTTTGCTCAAGTCTCCTGGTTCTCAGATGTTTCTCCTCTCAACAATGTCCCAAACCCCACTCAGATTTGCTAAGACACAAAAGTATGCAAACCAGTCTTTTACAAAGTCAGAGATCTCAATTTAAACTCAAACATTTCTCCAATTGTTCCAACTTTAAACCGTGATCCACAATAAATGCAATAGGTTTACTTTTACTGGATGTCAATAATTGTCTTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547888 True 243 lncRNA 0.36 1 320855 321097

Neighbor

gene id symbol gene type direction distance location
CI01000335_00286459_00296460 NA coding upstream 23599 284727 ~ 297256 (+)
CI01000335_00193513_00197704 NA coding upstream 123091 191873 ~ 197764 (+)
CI01000335_00149953_00163006 TFEC coding upstream 157316 149953 ~ 163539 (+)
CI01000335_00103583_00132304 NA coding upstream 188426 103472 ~ 132429 (+)
CI01000335_00077557_00081374 CD5L coding upstream 239369 75813 ~ 81486 (+)
CI01000335_00489106_00492720 NA coding downstream 167591 488688 ~ 492973 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding downstream 205854 526951 ~ 537487 (+)
CI01000335_00586957_00597421 TMEM168A coding downstream 265860 586957 ~ 598108 (+)
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding downstream 360333 681430 ~ 741222 (+)
CI01000335_00884515_00888701 NA coding downstream 563241 884338 ~ 888831 (+)
G477451 NA non-coding upstream 2259 318366 ~ 318596 (+)
G477438 NA non-coding upstream 29824 290807 ~ 291031 (+)
G477436 NA non-coding upstream 39726 280924 ~ 281129 (+)
G477435 NA non-coding upstream 41072 279568 ~ 279783 (+)
G477431 NA non-coding upstream 46905 273743 ~ 273950 (+)
G477454 NA non-coding downstream 571 321668 ~ 321907 (+)
G477456 NA non-coding downstream 3665 324762 ~ 324963 (+)
G477457 NA non-coding downstream 4028 325125 ~ 325439 (+)
G477458 NA non-coding downstream 4762 325859 ~ 326080 (+)
G477441 NA non-coding downstream 6787 327884 ~ 393126 (+)
G477502 NA other downstream 228425 549522 ~ 554633 (+)

Expression


Co-expression Network