G477454


Basic Information

Item Value
gene id G477454
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 321668 ~ 321907 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547889
CTTCCTTCAAAAGTAAGCTTAGAAGAAACATCTGAGACCAATTTGATATTAAAACATAACTAAAATCCTATGACAAAGCAACCTCTGAATAATAAAATTTCCCTCTGGGTAGACGTATAACTGCTCATTGACTTCCTCAGCAGTTGCGAAAATAATAATAGTGATCAGGTATATCGTGTCATTTTCAGGAAATGGCGACAGTAAATTCACAGAAGATGGTCCAGACATGGTGCTACCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547889 True 240 lncRNA 0.36 1 321668 321907

Neighbor

gene id symbol gene type direction distance location
CI01000335_00286459_00296460 NA coding upstream 24412 284727 ~ 297256 (+)
CI01000335_00193513_00197704 NA coding upstream 123904 191873 ~ 197764 (+)
CI01000335_00149953_00163006 TFEC coding upstream 158129 149953 ~ 163539 (+)
CI01000335_00103583_00132304 NA coding upstream 189239 103472 ~ 132429 (+)
CI01000335_00077557_00081374 CD5L coding upstream 240182 75813 ~ 81486 (+)
CI01000335_00489106_00492720 NA coding downstream 166781 488688 ~ 492973 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding downstream 205044 526951 ~ 537487 (+)
CI01000335_00586957_00597421 TMEM168A coding downstream 265050 586957 ~ 598108 (+)
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding downstream 359523 681430 ~ 741222 (+)
CI01000335_00884515_00888701 NA coding downstream 562431 884338 ~ 888831 (+)
G477453 NA non-coding upstream 571 320855 ~ 321097 (+)
G477451 NA non-coding upstream 3072 318366 ~ 318596 (+)
G477438 NA non-coding upstream 30637 290807 ~ 291031 (+)
G477436 NA non-coding upstream 40539 280924 ~ 281129 (+)
G477435 NA non-coding upstream 41885 279568 ~ 279783 (+)
G477456 NA non-coding downstream 2855 324762 ~ 324963 (+)
G477457 NA non-coding downstream 3218 325125 ~ 325439 (+)
G477458 NA non-coding downstream 3952 325859 ~ 326080 (+)
G477441 NA non-coding downstream 5977 327884 ~ 393126 (+)
G477523 NA non-coding downstream 83146 405053 ~ 406281 (+)
G477502 NA other downstream 227615 549522 ~ 554633 (+)

Expression


Co-expression Network