G477458


Basic Information

Item Value
gene id G477458
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 325859 ~ 326080 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547893
AGAGTGTAGTTTTCAAGTCATTTTTGCCACTTCTCAATTGTATTTTAGTAAAAAACAATTTTTGATCAAGATCTAAACATTCAGCAAAATGATAAGAAAACAAAAATATTGAATGCAAAACATCCCCAGCCATTGTCACAGTCAATTAAGTGTGGCTAGGTAATGAGGCCATTTGCATTGTAAAGCATCCCCCATGTGTGAGGGTTTTAATGGGGACAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547893 True 222 lncRNA 0.36 1 325859 326080

Neighbor

gene id symbol gene type direction distance location
CI01000335_00286459_00296460 NA coding upstream 28603 284727 ~ 297256 (+)
CI01000335_00193513_00197704 NA coding upstream 128095 191873 ~ 197764 (+)
CI01000335_00149953_00163006 TFEC coding upstream 162320 149953 ~ 163539 (+)
CI01000335_00103583_00132304 NA coding upstream 193430 103472 ~ 132429 (+)
CI01000335_00077557_00081374 CD5L coding upstream 244373 75813 ~ 81486 (+)
CI01000335_00489106_00492720 NA coding downstream 162608 488688 ~ 492973 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding downstream 200871 526951 ~ 537487 (+)
CI01000335_00586957_00597421 TMEM168A coding downstream 260877 586957 ~ 598108 (+)
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding downstream 355350 681430 ~ 741222 (+)
CI01000335_00884515_00888701 NA coding downstream 558258 884338 ~ 888831 (+)
G477457 NA non-coding upstream 420 325125 ~ 325439 (+)
G477456 NA non-coding upstream 896 324762 ~ 324963 (+)
G477454 NA non-coding upstream 3952 321668 ~ 321907 (+)
G477453 NA non-coding upstream 4762 320855 ~ 321097 (+)
G477451 NA non-coding upstream 7263 318366 ~ 318596 (+)
G477441 NA non-coding downstream 1804 327884 ~ 393126 (+)
G477523 NA non-coding downstream 78973 405053 ~ 406281 (+)
G477489 NA non-coding downstream 197634 523714 ~ 526896 (+)
G477505 NA non-coding downstream 229168 555248 ~ 612384 (+)
G477502 NA other downstream 223442 549522 ~ 554633 (+)

Expression


Co-expression Network