Gene
RNA
| Item | Value |
|---|---|
| gene id | G477636 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000335 |
| NCBI id | null |
| chromosome length | 1176510 |
| location | 818147 ~ 818353 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU548088 | True | 207 | lncRNA | 0.37 | 1 | 818147 | 818353 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000335_00681430_00741137 | DOCK4B, DOCK4 | coding | upstream | 76925 | 681430 ~ 741222 (+) |
| CI01000335_00586957_00597421 | TMEM168A | coding | upstream | 220039 | 586957 ~ 598108 (+) |
| CI01000335_00526951_00528066 | GPR85.L, GPR85 | coding | upstream | 288489 | 526951 ~ 537487 (+) |
| CI01000335_00489106_00492720 | NA | coding | upstream | 325174 | 488688 ~ 492973 (+) |
| CI01000335_00286459_00296460 | NA | coding | upstream | 520891 | 284727 ~ 297256 (+) |
| CI01000335_00884515_00888701 | NA | coding | downstream | 65985 | 884338 ~ 888831 (+) |
| CI01000335_00930276_00934328 | NA | coding | downstream | 111923 | 930276 ~ 936380 (+) |
| CI01000335_00988268_00990978 | NA | coding | downstream | 169915 | 988268 ~ 991337 (+) |
| CI01000335_01029328_01043603 | NA | coding | downstream | 210975 | 1029328 ~ 1043603 (+) |
| CI01000335_01055918_01061590 | TNNT2D, TNNT2E | coding | downstream | 237565 | 1055918 ~ 1061716 (+) |
| G477605 | NA | non-coding | upstream | 15075 | 717098 ~ 803072 (+) |
| G477497 | NA | non-coding | upstream | 190857 | 624798 ~ 627290 (+) |
| G477589 | NA | non-coding | upstream | 194933 | 622740 ~ 623214 (+) |
| G477588 | NA | non-coding | upstream | 195984 | 621964 ~ 622163 (+) |
| G477505 | NA | non-coding | upstream | 205763 | 555248 ~ 612384 (+) |
| G477651 | NA | non-coding | downstream | 42150 | 860503 ~ 860797 (+) |
| G477511 | NA | non-coding | downstream | 45340 | 863693 ~ 881031 (+) |
| G477660 | NA | non-coding | downstream | 72496 | 890849 ~ 891075 (+) |
| G477668 | NA | non-coding | downstream | 85570 | 903923 ~ 904142 (+) |
| G477669 | NA | non-coding | downstream | 85875 | 904228 ~ 904453 (+) |
| G477502 | NA | other | upstream | 263514 | 549522 ~ 554633 (+) |
