Gene
RNA
| Item | Value |
|---|---|
| gene id | G477651 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000335 |
| NCBI id | null |
| chromosome length | 1176510 |
| location | 860503 ~ 860797 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU548103 | True | 295 | lncRNA | 0.33 | 1 | 860503 | 860797 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000335_00681430_00741137 | DOCK4B, DOCK4 | coding | upstream | 119281 | 681430 ~ 741222 (+) |
| CI01000335_00586957_00597421 | TMEM168A | coding | upstream | 262395 | 586957 ~ 598108 (+) |
| CI01000335_00526951_00528066 | GPR85.L, GPR85 | coding | upstream | 330845 | 526951 ~ 537487 (+) |
| CI01000335_00489106_00492720 | NA | coding | upstream | 367530 | 488688 ~ 492973 (+) |
| CI01000335_00286459_00296460 | NA | coding | upstream | 563247 | 284727 ~ 297256 (+) |
| CI01000335_00884515_00888701 | NA | coding | downstream | 23541 | 884338 ~ 888831 (+) |
| CI01000335_00930276_00934328 | NA | coding | downstream | 69479 | 930276 ~ 936380 (+) |
| CI01000335_00988268_00990978 | NA | coding | downstream | 127471 | 988268 ~ 991337 (+) |
| CI01000335_01029328_01043603 | NA | coding | downstream | 168531 | 1029328 ~ 1043603 (+) |
| CI01000335_01055918_01061590 | TNNT2D, TNNT2E | coding | downstream | 195121 | 1055918 ~ 1061716 (+) |
| G477636 | NA | non-coding | upstream | 42150 | 818147 ~ 818353 (+) |
| G477605 | NA | non-coding | upstream | 57431 | 717098 ~ 803072 (+) |
| G477497 | NA | non-coding | upstream | 233213 | 624798 ~ 627290 (+) |
| G477589 | NA | non-coding | upstream | 237289 | 622740 ~ 623214 (+) |
| G477588 | NA | non-coding | upstream | 238340 | 621964 ~ 622163 (+) |
| G477511 | NA | non-coding | downstream | 2896 | 863693 ~ 881031 (+) |
| G477660 | NA | non-coding | downstream | 30052 | 890849 ~ 891075 (+) |
| G477668 | NA | non-coding | downstream | 43126 | 903923 ~ 904142 (+) |
| G477669 | NA | non-coding | downstream | 43431 | 904228 ~ 904453 (+) |
| G477679 | NA | non-coding | downstream | 51389 | 912186 ~ 912406 (+) |
| G477502 | NA | other | upstream | 305870 | 549522 ~ 554633 (+) |
