G477669


Basic Information

Item Value
gene id G477669
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 904228 ~ 904453 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU548124
GAAAAAATATATATATTTTGCATTATTTTTTGTCCTATTTGTGTGAAAATCTTTTGGAAATATGATCAAATGATATGTGTCAAGAAAGATGTTTAAAATCACAGATGATGTAAGGTCAAGTTAAGCACATTGCATTGTGGGATACAATGTGCTCGAGTTGTATAATGCATATATCAGCAAAATGTGCACAGTATACTTTCTATGTCATTCCAAATATAACCACCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU548124 True 226 lncRNA 0.30 1 904228 904453

Neighbor

gene id symbol gene type direction distance location
CI01000335_00884515_00888701 NA coding upstream 15397 884338 ~ 888831 (+)
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding upstream 163006 681430 ~ 741222 (+)
CI01000335_00586957_00597421 TMEM168A coding upstream 306120 586957 ~ 598108 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding upstream 374570 526951 ~ 537487 (+)
CI01000335_00489106_00492720 NA coding upstream 411255 488688 ~ 492973 (+)
CI01000335_00930276_00934328 NA coding downstream 25823 930276 ~ 936380 (+)
CI01000335_00988268_00990978 NA coding downstream 83815 988268 ~ 991337 (+)
CI01000335_01029328_01043603 NA coding downstream 124875 1029328 ~ 1043603 (+)
CI01000335_01055918_01061590 TNNT2D, TNNT2E coding downstream 151465 1055918 ~ 1061716 (+)
CI01000335_01109924_01114152 ELK3 coding downstream 205471 1109924 ~ 1114152 (+)
G477668 NA non-coding upstream 86 903923 ~ 904142 (+)
G477660 NA non-coding upstream 13153 890849 ~ 891075 (+)
G477511 NA non-coding upstream 23197 863693 ~ 881031 (+)
G477651 NA non-coding upstream 43431 860503 ~ 860797 (+)
G477636 NA non-coding upstream 85875 818147 ~ 818353 (+)
G477679 NA non-coding downstream 7733 912186 ~ 912406 (+)
G477681 NA non-coding downstream 10625 915078 ~ 955515 (+)
G477702 NA non-coding downstream 55786 960239 ~ 960575 (+)
G477703 NA non-coding downstream 56241 960694 ~ 960936 (+)
G477706 NA non-coding downstream 62271 966724 ~ 967136 (+)
G477502 NA other upstream 349595 549522 ~ 554633 (+)

Expression


Co-expression Network