G477702


Basic Information

Item Value
gene id G477702
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 960239 ~ 960575 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU548157
AGAAAATGCTGCTATCGTCACTTAGTGTAAATAGAATGTATCGCTAGTTTCACTTATTGTAAATAGCATCTACAGCTATTTGCACTGTAAATGATTATATTTATTAAAATGATTAAATGGATGCTGCCTTATTGGGAGAATTAAAAACACCTTCCCCTAACCCTACCCAATAAATACTTTTAATATTATTAAACACTCGTTAGGCAGTTTATTTCCACTTTTAGAACATTATTTTCATTTTTATTAAAAATAAATGCCTTTCTGATGTGATTTGTGATGGGAAAATAGAGAAGAGTGAGCTTGGCAAAAGGCGGATTCGAACCTGCGGCGATCACGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU548157 True 337 lncRNA 0.33 1 960239 960575

Neighbor

gene id symbol gene type direction distance location
CI01000335_00930276_00934328 NA coding upstream 23859 930276 ~ 936380 (+)
CI01000335_00884515_00888701 NA coding upstream 71408 884338 ~ 888831 (+)
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding upstream 219017 681430 ~ 741222 (+)
CI01000335_00586957_00597421 TMEM168A coding upstream 362131 586957 ~ 598108 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding upstream 430581 526951 ~ 537487 (+)
CI01000335_00988268_00990978 NA coding downstream 27693 988268 ~ 991337 (+)
CI01000335_01029328_01043603 NA coding downstream 68753 1029328 ~ 1043603 (+)
CI01000335_01055918_01061590 TNNT2D, TNNT2E coding downstream 95343 1055918 ~ 1061716 (+)
CI01000335_01109924_01114152 ELK3 coding downstream 149349 1109924 ~ 1114152 (+)
G477681 NA non-coding upstream 4724 915078 ~ 955515 (+)
G477679 NA non-coding upstream 47833 912186 ~ 912406 (+)
G477669 NA non-coding upstream 55786 904228 ~ 904453 (+)
G477668 NA non-coding upstream 56097 903923 ~ 904142 (+)
G477660 NA non-coding upstream 69164 890849 ~ 891075 (+)
G477703 NA non-coding downstream 119 960694 ~ 960936 (+)
G477706 NA non-coding downstream 6149 966724 ~ 967136 (+)
G477711 NA non-coding downstream 13342 973917 ~ 974202 (+)
G477714 NA non-coding downstream 111002 1071577 ~ 1074461 (+)
G477504 NA non-coding downstream 115692 1076267 ~ 1078026 (+)
G477502 NA other upstream 405606 549522 ~ 554633 (+)

Expression


Co-expression Network