G477504


Basic Information

Item Value
gene id G477504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 1076267 ~ 1078026 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547949
TCTCTCTATTGATGCCTCAGCACCAAAGAGCGTTTGTTTAACCACTTGTGCCACTGTGGCTTTCACATTGAGTGCTGGTGTTTGGGCCACTTTGTTAGATATAATGCCAACAATGTAACATAGGCAATAGTGGGATTTGAACCCACACCTCGATTGCAGTCTCATCATAAGAGAACATGCATTTAGCCACTTGTGCCACTGTGACTTTCACGCTGAGCTTTGGTGTCTGGGCCACTTTGTTGGATATAATCCCAACAATTTAATGATTGCAATAGTGAGATTCAAACCCATGTCTCTATCACAGTCTTGTCACCAAAGAGCATGTGTTTAACCACTTGTGCCACTGTGGCTTTTACATTGAGTTCTGGTGTTTGGGCCACTTTGTTAGATGTAATACCAACAATGTAACATAGGCAATAACAGGATTTGAACTCAGTTCTCCATGATTAACTCACAATGTTTTATCACCTGAGCCACTGAGTCTGGTTGGTCACTTACCTTTGAAATTAAGCTATAACATTAATTATATCAAGAACTTAAGTTAAGCAAAGGCAGAATCTGAACCAGGACACCATGTATAATCCACAAGCCTTTATGGCTTAAATCACTGAGCTTTATTTGGTCAGTTTGCTTTTGGAAATTTTAACATTTTCTGTCTTCAACATGGACAGTGTTGCCAATTTAGCAATTTTGTCACTAGATTTAGTGACTTCCCCACCCCTTTTGATACTTTTTTCAAAAGTTAGGGACAAATCTAACAACTTCTTGGACAAACCTTATCTAGATTCTTATTTTTCCCACTGATCTATATTCATATTTATATAGATCAATGAATTTGTCATTATGATGTAATTTATTGACATCCAGCTACCAGTTTTAGCTACTTTTAATTGAAAACAGTTGGCAACACTGAACATGGACAAATTAAAAGAGAGCAAAATAGTAACCTAAAATCTGTTAAATTAAAACCCAGGACAAAACACATTGTTTGAAGCAAGTCACAGGTAGTTCAAAGGAACACTGTTTCTCCACAAGGGTAACACTAAACAATATAGACCCACATAATCAACACTAAACAGAGCTTTAACCCATTTTAACTACAAATAACTATATCCATCTTTTTTTAATAAACATCAACCCATATTAACTACAAATGAATATATACATGTTTCATAAACATCTCAAATAGACAGCTAATTAAATATTCGTCTGCCACAGCCAATCAGAACTCACATTACCACATAATACACAGCACGGTCTATGATTCCTTTGAGTTTGAATAGACCAAAGCATCAAATATATTTCCTTTGAGTTTGAGGATAAGGAAGATCCTTTCAGGAGCAGTCATGGACACACCAGGGTTAGCCACAAATGTTTAATGACATGAAAGGTCTTCCTGCTCCTTGAGGTCCACCGTCCTTAGTTTTCCTCCAACCTTTTCAGAAAACACATTTGATGTCAGTATCTGTGTCTCTTTCCGAAGAGTGCGCCCTCTGGAGGTCGCATTTGTCAGCTGCATGCATTGTAGTGCCAAGCTAACTTACCTAAATGTGTTCTGGTCAAGTGAACTTTATGGTCAGTCGTAAGTGAGACATTTAATTCTCATAAGTTTGAAATCTAATCTATGATTTTGTCAGGATCTGAGTCAGATCAGCTCTCATCTGATGGGGTAAGATAAAATGATCTGCTGAAAGGCTGAAAAAGATCCAAGATTGTATGTGTCAAGTTTATTTGTTTTTGTCTTTTTAAGTGATGTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547949 True 1760 lncRNA 0.37 1 1076267 1078026

Neighbor

gene id symbol gene type direction distance location
CI01000335_01055918_01061590 TNNT2D, TNNT2E coding upstream 14551 1055918 ~ 1061716 (+)
CI01000335_01029328_01043603 NA coding upstream 32664 1029328 ~ 1043603 (+)
CI01000335_00988268_00990978 NA coding upstream 84930 988268 ~ 991337 (+)
CI01000335_00930276_00934328 NA coding upstream 139887 930276 ~ 936380 (+)
CI01000335_00884515_00888701 NA coding upstream 187436 884338 ~ 888831 (+)
CI01000335_01109924_01114152 ELK3 coding downstream 31898 1109924 ~ 1114152 (+)
G477714 NA non-coding upstream 1806 1071577 ~ 1074461 (+)
G477711 NA non-coding upstream 102065 973917 ~ 974202 (+)
G477706 NA non-coding upstream 109131 966724 ~ 967136 (+)
G477703 NA non-coding upstream 115331 960694 ~ 960936 (+)
G477702 NA non-coding upstream 115692 960239 ~ 960575 (+)
G477496 NA non-coding downstream 4389 1082415 ~ 1083264 (+)
G477517 NA non-coding downstream 47977 1126003 ~ 1129011 (+)
G477502 NA other upstream 521634 549522 ~ 554633 (+)

Expression


Co-expression Network