G477496


Basic Information

Item Value
gene id G477496
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 1082415 ~ 1083264 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547941
CAAAAAGGCTACCTTATGAACTACTTCTGCCCATTGAAATGTGCAACTTAAAGTCCATTTCAAAAGAAAAACATACGCATGTTGAGCATATGTACATATGAAATACATACATTTAGGTGTCATGCACCTTATTCAGTATCAACATGATTTTTATTGGAGAAAAGAATAGAAATTTCTTGTACACATGAGTTTATTACAGAACATTACTTTTGAATTATCATATAAAGGGATATAGTGGATCATTCATACCAAGAAATGCTTTTTTTTAACACTAAACTGCATGATACTGAAACTCCTCATTTTTTGTTCTAAGCCCTGAGACTGAAACCTCCAAGACATTAAAAAGCCAAGCTTTGGCCAATGAGAGAAACATTCTGCACATTAATTCATTTGCTAAAGTTGTGAGATGCAGGCTTGCATCCAAGCACTAAGCTGAAGCACAGAAATACTGCTTGGCCACCAGCATCGCTGTGACAGGGTGCAGTGCTCCACGGTGCTCCTTAAAAGTCTTCACTGCCTCGTCGCTGTACTTGGAGAAGTTGTAAACTTCCCTAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTCAGCAAGTGCACACTAGGACTTTGAAATGGTCTTGAAGAGCTCTGGAATTAAAAACAGAAGTTTGCAGGGTCAAAGACAATGAAGTGTTTGGTTGCTCATGGCAGCAAGGAAATTACAAAACTCTCTGTAACATCCTGTTCATTTTTTTTTCTTTTGCTACATTTTCAACATGTGACCCCATTAATTGTTGTTGCTGTTANNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547941 True 798 lncRNA 0.38 2 1082415 1083264

Neighbor

gene id symbol gene type direction distance location
CI01000335_01055918_01061590 TNNT2D, TNNT2E coding upstream 20699 1055918 ~ 1061716 (+)
CI01000335_01029328_01043603 NA coding upstream 38812 1029328 ~ 1043603 (+)
CI01000335_00988268_00990978 NA coding upstream 91078 988268 ~ 991337 (+)
CI01000335_00930276_00934328 NA coding upstream 146035 930276 ~ 936380 (+)
CI01000335_00884515_00888701 NA coding upstream 193584 884338 ~ 888831 (+)
CI01000335_01109924_01114152 ELK3 coding downstream 26660 1109924 ~ 1114152 (+)
G477504 NA non-coding upstream 4389 1076267 ~ 1078026 (+)
G477714 NA non-coding upstream 7954 1071577 ~ 1074461 (+)
G477711 NA non-coding upstream 108213 973917 ~ 974202 (+)
G477706 NA non-coding upstream 115279 966724 ~ 967136 (+)
G477703 NA non-coding upstream 121479 960694 ~ 960936 (+)
G477517 NA non-coding downstream 42739 1126003 ~ 1129011 (+)
G477502 NA other upstream 527782 549522 ~ 554633 (+)

Expression


Co-expression Network