G477517


Basic Information

Item Value
gene id G477517
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 1126003 ~ 1129011 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547962
CAACTAAAACTTTTACACTAGGGATGTAGCTAACAGATTAACCTTTTAATGACAATAATAAAAAAATAAATAGATAAATATTACACCAATATTGTACAACTAAAACTTTTATACTAGGGATGTAGTTACCAGTTTAACCCTTTACTGACAATTATCAACTAATATCATCAGTCTAAAAAAATAAATAAATTATTACATCAATATTGTACAACTAAAACTTTTACACTAGGGATGTAGTCAACAAATGAATCATTTACTAATAAGTTCAAACCAATTATGTCCCTATTGTACAACTAACAACAGAAAAATACTTTGGGTTGTGCTTCATTTTGTTCCCCTTATTACAATGTAATTATAGATTTAAGTACTGCATAATATTAATTAATTAACATGCTTACTACAGGGTTAGATTTTTGGTTTAGGGACCGTTGCATGTAATTATAAATAATTTACTGTTAAGTAACAACGTAACAAGTAACAACGTGTAACAAGAACACTAAAATAAAGTGTTACCGAACTTTGAAAAATATCTTATGTACAGTCACATGATATGAAGACTGCCATCAGTGACCAAAACCATCTCAACAACCTTATTATGAACATGTTCAGTTATATGATTATCACTTCTTGTACTTTTAAATGACCATTTCTGACAGCTGATGAGGGTGAAATAATGAAAGGTCAGCACTAGACTGTACCTCTCCCAACTTGTCCAGTTTGATGTAGGTCTCCAGTTTCCCAAAGCCGATTTCTGACTATAAAAAGAGAAAAAGACAGGGACTGCTTCATTAATGAGATCTGGTTAATGCTGAACAGCCTGCGTGTGTTCAACAGACCTTATCAGTGAGAAACACGTGTCTGGAGTGTTGCTCGCCGTCTCTGATATCTGCAGCCAAAATCACTTCCCAGACAAAGCCATTAATCACACACACACTGTATCCAGACTCCCACGGGCACCAGGGGGCACCAGAACAACAACATAAACCCCCTCTACTTTACACACATGGAGGGTTGGAGGTGGGGACGACATAGACGGATGACAGCTAAGAACAATGGATGCCAAGTAAACCCAGACGCAAAAGCAGGGAGCTTTTCACATGCAAAACCCCCTATGTATGCGGCCAACAGACAAAGAACATGGTATGTGTCTTTGTGCTCAACTGAGAGTACGACACAATGTTTGTAGCGACACACTGGGGTTCTCGTCCACGGGCCGGGTTTATCTGCAGCAGGCCATGTTGTTTTGAAAAGCTTGCTGTGGACTGTGTACTCATTAACTCAAGCTTAAAATTCTCCAGACGTAATCTTTTACCCTTAAAAAAAGTGGCTCAAACAAACAAAAATCCTTTACTCAGCCTCATGTCATTCCAAATTCGTTTGACTTTCTTTTTATCTATGGAACATAAAAGTTCTTCACAATTGTATTTTGCATACATTAAAGTTTGTACAATGAGATTTCAAACAACTAAAAAGCAGTTTAAAAGTAGCCCATACAGTTTGTGCATTATATTTCAGTAAGTCTTATATAGGCTTATGATAGTTTTCTCTGTGCTTCTGAAATCTCATTTGATCAGATCACATTTTGTAACCAATCGTGATGAACAAAAGTTAGAACGATAGAACAATAGATAGAAATGACAGACAGAACGATCGATAGATAGAACGATCGATAGATAGAGCTGCTCATCTCACAGTGATGATTGGATGGATTGTTGGGAAAAGTACGATAGATAGAATGATTGAATGAAGGAACAATCAATCAATCAATCAATCAATCAATATAGATCGAAAAAGCTGCTCGGATGGATGGATGGGTTGGTCAGTGGATGGATGGATGAATGGGAAAATAGCTAAAACAACAGAACGATAGATGAAATGATTGAACGATAGAGCTGCTCAGCTCACAATGATGGATGGATGGATGGATGGATGGATGGGAAAAGAGCTTCTAGAATGATAGACCGAACGAACAAACGATCAATCGATAGAGCTACTCGGCTCAGAGTGACGGATGGATGGATGATGGATGGGAAAAGAGCTGCTAAAATAATAGAACGAACGAAGGATCGATCAATCAATAGAGATAGAATTTTGGGGTGAAATATGACCTGCATATGTCAATGACATTCAACCAGAAAAATCCTTGTATACAAAAGCATTACAAGTTTAACAGATCATATATTAGAAACCCACAATAGGGCTAAAAATAGTGCTTTCTGGAGCTTAACAGCTCCTAGTTATTGTATGATTCCACTGCACTGATGATTAAAAGCAACTTATACATTGTGCAAAGCATCTCCTGTTGTGTTTCACAGAAGAATGAATGTCAAATAGGTTTGATACAACATGAGGACGAGTAAATGCTGACACAATCATTTCCAGGTGAACCGCCAATTTAAACAGATCTAAAACACACCATTAGCGTCACTCAGAAAGCACTTGTTTTTAGAAGTATCTTTCTCAATGTTTAAACCATTTTCTCTCAGCGTGACAATGGCTTGCTGTTTGACAGCCATGTAATCGTTTTAACCCGGCCAGACTGAATAATCTACATAAATCCCACATTGTGTTTGAAACAATAATGTTTATTAATCTTGAACATCATGATCTCACAGCCATTCATGTCAATGGGGAAACCTAACATGGAGTTGTGTTGCTATGCAGCGTTGCTTCTGATATGCTCAACAAAGAGATGCACGGCATTTTGCCAAACCTAGGATACAGTGATTCATTTCTGAGATAAAATGAGGAGATTTCCCATGTTTAAGTGGTTTAGAGGAAGCACAAAAACATACTTGAGACTACTAGGGAGCAAATATGACATTATAAAGATGACCTCAGGGGTTATGCAAACAAACTTACCAGCGAGGCTCTGCGCGATCGTCGACTGAGGGGTTGGTCAAACGGCGGGCTGCTCAACTGTAGCTTTTCCAGGTAACCGTCAGGAATCCGGATATCAGCAGGCAAAGACAAGCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547962 True 2977 lncRNA 0.38 2 1126003 1129011

Neighbor

gene id symbol gene type direction distance location
CI01000335_01109924_01114152 ELK3 coding upstream 11851 1109924 ~ 1114152 (+)
CI01000335_01055918_01061590 TNNT2D, TNNT2E coding upstream 64287 1055918 ~ 1061716 (+)
CI01000335_01029328_01043603 NA coding upstream 82400 1029328 ~ 1043603 (+)
CI01000335_00988268_00990978 NA coding upstream 134666 988268 ~ 991337 (+)
CI01000335_00930276_00934328 NA coding upstream 189623 930276 ~ 936380 (+)
G477496 NA non-coding upstream 42739 1082415 ~ 1083264 (+)
G477504 NA non-coding upstream 47977 1076267 ~ 1078026 (+)
G477714 NA non-coding upstream 51542 1071577 ~ 1074461 (+)
G477711 NA non-coding upstream 151801 973917 ~ 974202 (+)
G477706 NA non-coding upstream 158867 966724 ~ 967136 (+)
G477502 NA other upstream 571370 549522 ~ 554633 (+)

Expression


Co-expression Network