XLOC_013423 (si:ch73-113g13.2)


Basic Information

Item Value
gene id XLOC_013423
gene name si:ch73-113g13.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 22712638 ~ 22713621 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026509
ATGGAGCTCAATGCAAGCTTCAACTCAACACCTATTCAATTCAACACCAATTCAACTCCTGCTGTGGGTTCAGAGAAGATCGCTCCTGCTGTAGTTCTGGGTTTGTGTTGTTTGGTAGGTTTGCCGAGCAACATTGCAGTAATCGTCAGCATTGCTCGTGAGTGGAACAAAAATCTGAGCTTCACTTTAAAACTGATGCTCAACCTCGCGGTCTCTGATACTTTGAGTCTTTGCTTGGCTCCTTTTGTGCTGTTTGGAATTCTATTTGGATGGAAATTCGGCCTGTGGTTTTGTAGATTCCTGTTTTTCTTGGGTCACTGGAGTCTGTATGTTGGCGTCCTAACGGTCACGTCCATGAGTGTGCACCGCTATCACAATGTCATCAAGTCAAGGGTTGCTAACAGGATGATTTTGCACAGACTGGAGCGACGACACAGATACCTTCAGCTGATCTGCATCTGGACTCTTGCCTTTGTTTTTGCCCTACCAGTATTTTTCACCCAAGACCTCAAAGACCGGGATGGATTCCAAAGATGTCAGAGGACAATGAGCTCAATGGCTGTAGAAGTGACAGTATTAGTTCTTGAGATCTTGTTGGCTTTTGTCATTCCGTTTTTAATCATGTTGACACGTTATCTGTGGCTGCATAAAGGTTTGAGTCAAAACTCGAGCTTCACCAGAGCTCCACAGGAGCAGGAATCAAAAAACCGGAGAACTAACTTTAAGGTTTACAAGAAGAGACTTGTGATCAGCATCGTTGTGGCTTTCTTTGTGTTTTGGACTCCTGTGCACATCATCAATGTGATTGATATAGTAATTACTCTGACTAAAACATCTGATCCAGAAGTTAATTCACAGCTGAAGTCCTTCCGCCGTGTTTATGGTGACACAAGCAAGGCTTCGGCTTTGTTTAACTGTTGTTTGAATCCTTTCCTTTATGCCATTTCTTTAGGAAACCTTGTTAAATGTTTCAGAAAGAGATGA
>TCONS_00026510
ACTTTGAGTCTTTGCTTGGCTCCTTTTGTGCTGTTTGGAATTCTATTTGGATGGAAATTCGGCCTGTGGTTTTGTAGATTCCTGTTTTTCTTGGGTCACTGGAGTCTGTATGTTGGCGTCCTAACGGTCACGTCCATGAGTGTGCACCGCTATCACAATGTCATCAAGTCAAGGGTTGCTAACAGGATGATTTTGCACAGACTGGAGCGACGACACAGATACCTTCAGCTGATCTGCATCTGGACTCTTGCCTTTGTTTTTGCCCTACCAGTATTTTTCACCCAAGACCTCAAAGACCGGGATGGATTCCAAAGATGTCAGAGGACAATGAGCTCAATGGCTGTAGAAGTGACAGTATTAGTTCTTGAGATCTTGTTGGCTTTTGTCATTCCGTTTTTAATCATGTTGACACGTTATCTGTGGCTGCATAAAGGTTTGAGTCAAAACTCGAGCTTCACCAGAGCTCCACAGGAGCAGGAATCAAAAAACCGGAGAACTAACTTTAAGGTTTACAAGAAGAGACTTGTGATCAGCATCGTTGTGGCTTTCTTTGTGTTTTGGACTCCTGTGCACATCATCAATGTGATTGATATAGTAATTACTCTGACTAAAACATCTGATCCAGAAGTTAATTCACAGCTGAAGTCCTTCCGCCGTGTTTATGGTGACACAAGCAAGGCTTCGGCTTTGTTTAACTGTTGTTTGAATCCTTTCCTTTAT

Function

symbol description
si:ch73-113g13.2 Predicted to enable G protein-coupled receptor activity and neuropeptide binding activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000056506

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026509 False 984 mRNA 0.43 1 22712638 22713621
TCONS_00026510 True 720 mRNA 0.43 1 22712683 22713402

Neighbor

gene id symbol gene type direction distance location
XLOC_013422 si:ch73-113g13.3 coding downstream 10655 22701030 ~ 22701983 (-)
XLOC_013421 si:dkey-11d18.4 coding downstream 16281 22695407 ~ 22696357 (-)
XLOC_013420 CR933017.1 coding downstream 160324 22550595 ~ 22552314 (-)
XLOC_013419 tmem170a coding downstream 298073 22405707 ~ 22414565 (-)
XLOC_013418 si:dkey-45h7.1 coding downstream 561975 22149561 ~ 22150663 (-)
XLOC_013424 si:ch73-113g13.1 coding upstream 3087 22716708 ~ 22717673 (-)
XLOC_013425 nudt21 coding upstream 7930 22721551 ~ 22735002 (-)
XLOC_013426 BX088710.1 coding upstream 26111 22739732 ~ 22753637 (-)
XLOC_013427 BX663522.1 coding upstream 145858 22859479 ~ 22862467 (-)
XLOC_013428 NA coding upstream 473108 23186729 ~ 23195554 (-)
XLOC_013384 BX323829.1 misc downstream 3170407 19542102 ~ 19542231 (-)
XLOC_013417 CT573204.2 non-coding downstream 628752 22083772 ~ 22083886 (-)
XLOC_013411 BX548157.1 non-coding downstream 992587 21712296 ~ 21720051 (-)
XLOC_013398 BX470160.1 non-coding downstream 1866325 20846190 ~ 20846313 (-)
XLOC_013395 BX470130.1 non-coding downstream 2078715 20633789 ~ 20633923 (-)
XLOC_013429 NA non-coding upstream 687509 23401130 ~ 23403453 (-)
XLOC_013430 NA non-coding upstream 725841 23439462 ~ 23608028 (-)

Expression


Co-expression Network