Item | Value |
---|---|
gene id | XLOC_013428 |
gene name | NA |
gene type | non-coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007129.7 |
NCBI id | CM002902.2 |
chromosome length | 51023478 |
location | 23186729 ~ 23195554 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
id | name | namespace |
---|---|---|
GO:0050877 | nervous system process | biological_process |
GO:0043010 | camera-type eye development | biological_process |
GO:0050953 | sensory perception of light stimulus | biological_process |
GO:0002088 | lens development in camera-type eye | biological_process |
GO:0007600 | sensory perception | biological_process |
GO:0007601 | visual perception | biological_process |
GO:0017156 | calcium-ion regulated exocytosis | biological_process |
GO:0017158 | regulation of calcium ion-dependent exocytosis | biological_process |
GO:0048880 | sensory system development | biological_process |
GO:0007626 | locomotory behavior | biological_process |
GO:0003008 | system process | biological_process |
GO:1903305 | regulation of regulated secretory pathway | biological_process |
GO:0001654 | eye development | biological_process |
GO:0007423 | sensory organ development | biological_process |
GO:0045055 | regulated exocytosis | biological_process |
GO:0150063 | visual system development | biological_process |
GO:0042995 | cell projection | cellular_component |
GO:0043005 | neuron projection | cellular_component |
GO:0044456 | obsolete synapse part | cellular_component |
GO:0120025 | plasma membrane bounded cell projection | cellular_component |
GO:0045202 | synapse | cellular_component |
GO:0097458 | obsolete neuron part | cellular_component |
GO:0005198 | structural molecule activity | molecular_function |
GO:0005212 | structural constituent of eye lens | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00027297 | False | 856 | lncRNA | 0.43 | 3 | 23186729 | 23188209 |
TCONS_00027298 | False | 847 | lncRNA | 0.43 | 2 | 23186729 | 23188268 |
TCONS_00027300 | False | 952 | lncRNA | 0.44 | 3 | 23186729 | 23188301 |
TCONS_00027299 | False | 927 | lncRNA | 0.44 | 3 | 23186729 | 23188301 |
TCONS_00026517 | False | 842 | lncRNA | 0.43 | 2 | 23186729 | 23189925 |
TCONS_00027301 | False | 995 | lncRNA | 0.43 | 2 | 23186729 | 23190082 |
TCONS_00027302 | False | 4174 | lncRNA | 0.37 | 1 | 23186729 | 23190902 |
TCONS_00027303 | True | 845 | lncRNA | 0.42 | 2 | 23186729 | 23195554 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_013427 | BX663522.1 | coding | downstream | 324262 | 22859479 ~ 22862467 (-) |
XLOC_013426 | BX088710.1 | coding | downstream | 433092 | 22739732 ~ 22753637 (-) |
XLOC_013425 | nudt21 | coding | downstream | 451727 | 22721551 ~ 22735002 (-) |
XLOC_013424 | si:ch73-113g13.1 | coding | downstream | 469056 | 22716708 ~ 22717673 (-) |
XLOC_013423 | si:ch73-113g13.2 | coding | downstream | 473108 | 22712638 ~ 22713621 (-) |
XLOC_013429 | NA | coding | upstream | 205576 | 23401130 ~ 23403453 (-) |
XLOC_013430 | NA | coding | upstream | 243908 | 23439462 ~ 23608028 (-) |
XLOC_013431 | NA | coding | upstream | 491021 | 23686575 ~ 23833909 (-) |
XLOC_013432 | nr2f2 | coding | upstream | 673096 | 23868650 ~ 24023261 (-) |
XLOC_013433 | NA | coding | upstream | 681925 | 23877479 ~ 23884654 (-) |
XLOC_013384 | BX323829.1 | misc | downstream | 3644498 | 19542102 ~ 19542231 (-) |
XLOC_013420 | CR933017.1 | non-coding | downstream | 634415 | 22550595 ~ 22552314 (-) |
XLOC_013417 | CT573204.2 | non-coding | downstream | 1102843 | 22083772 ~ 22083886 (-) |
XLOC_013411 | BX548157.1 | non-coding | downstream | 1466678 | 21712296 ~ 21720051 (-) |
XLOC_013434 | NA | non-coding | upstream | 851932 | 24047486 ~ 24083836 (-) |