XLOC_013433


Basic Information

Item Value
gene id XLOC_013433
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 23877479 ~ 23884654 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027314
TTGAGGAGCAGTTTATTTACTTTTGGCAGAAAAGTTACTGtacagcatttttgtttttaaattcaacaTTTCTAGTCTTGTCATCTTAAAGCTATTGCCATTATCATGTATAATCACACATTACAGCAAACGGTGCAGAATTACTATACATACGTAGACGATTCAAGCAGTTTGTTATCAGCTGACCCTTTGATCCTGTTGCCTGTAAGAGAATCTATTACAGGTTAGTTGCTCCAGTAACTCAAACACATACATTAAGGCTTACCTTCCCTGCATTGTGGGACGTTTGCATGATGTTCCTCCTCCCGTCATGCATTAGGTGTTGATGTCAGCACTCAGCattctccagtcttcagagtcctGCAGAGAGCTCCGACACAATGCAATGGTAGTCTGCCAGCCAGACCGCCGATTTTACCTTGGTCTTGGGGTAAAATCCACTTTGCATTGGTTCGATATAATTTACTTCTGCTGGATTGCTTTCGGCTGTGTTGTTCACTGGCTTTTGAATGGTCGGTGATGAGGCACGGTGTTCAGTTTTGATCGTTTCAATAAACtgagcaaaattaaccgaaacgCTGTAATATTCCCGTGCGTGAAAAAACACTCCGGAGAAAATGTGTAGCGTAGACCTACAAACGCACCTCTGCAACGTCCAAGTCAATTAGAAGGAAATCTCAAAAGCATTAATCAGATTAAAATAGGCGCATGTTACTTTGGTGTATGTGAGAGGCGAGCGACCGATGTAGTTTCCATTTAAGATGGCTCTTCCACCTTAAAGAGCGATTCCAGGCAGAAATAATCCAAACGCTAGGAGGCGCCCATATACTGCTGTACGTCCAGTCTCTTCTGCATTTTTCCTCCGAGGCAGCATATGCTGTGATTTAGCACTGTACATTTTTC
>TCONS_00027315
gcatttttgtttttaaattcaacaTTTCTAGTCTTGTCATCTTAAAGCTATTGCCATTATCATGTATAATCACACATTACAGCAAACGGTGCAGAATTACTATACATACGTAGACGATTCAAGCAGTTTGTTATCAGCTGACCCTTTGATCCTGTTGCCTGTAAGAGAATCTATTACAGGTTAGTTGCTCCAGTAACTCAAACACATACATTAAGGCTTACCTTCCCTGCATTGTGGGACGTTTGCATGATGTTCCTCCTCCCGTCATGCATTAGGTGTTGATGTCAGCACTCAGCattctccagtcttcagagtcctGCAGAGAGCTCCGACACAATGCAATGGTAGTCTGCCAGCCAGACCGCCGATTTTACTATCCTATGAAGAAGCAGAGAGTCTTCTGAATTCCCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027314 False 903 lncRNA 0.42 2 23877479 23884654
TCONS_00027315 True 411 lncRNA 0.42 2 23881809 23884610

Neighbor

gene id symbol gene type direction distance location
XLOC_013431 NA coding downstream 43570 23686575 ~ 23833909 (-)
XLOC_013430 NA coding downstream 269451 23439462 ~ 23608028 (-)
XLOC_013429 NA coding downstream 474026 23401130 ~ 23403453 (-)
XLOC_013428 NA coding downstream 681925 23186729 ~ 23195554 (-)
XLOC_013427 BX663522.1 coding downstream 1015012 22859479 ~ 22862467 (-)
XLOC_013434 NA coding upstream 162832 24047486 ~ 24083836 (-)
XLOC_013435 si:ch211-147m20.3 coding upstream 388774 24273428 ~ 24476910 (-)
XLOC_013436 CU855551.1 coding upstream 431527 24316181 ~ 24316299 (-)
XLOC_013437 NA coding upstream 612970 24497624 ~ 24561884 (-)
XLOC_013438 NA coding upstream 851705 24736359 ~ 24759440 (-)
XLOC_013384 BX323829.1 misc downstream 4335248 19542102 ~ 19542231 (-)

Expression


Co-expression Network