XLOC_013438



Basic Information


Item Value
gene id XLOC_013438
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 24736359 ~ 24759440 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00027341
CAGCAACAGATTTCTTTATCAAATTTACAACATAAATTTGACTACAAAATCCACCCTGTTGCATTACTGCACAGGGTTTAAAGCTAAAAGATGATGAGTTCAGACATGTCTTTGGGAGTTAGGGAAGCTTTTAAAGAGGGGCTTGATCTGGGGGGCTTCAGATAATTAATTAAACACAACCAGGGGGAAGCTGATGACAGCCATATTGCTCTTCTTCTATAATAGGGTGTTGAATTCCCTGCCCCTGAGGCCTGCTGCCGCTCAAGGAACCTTTTTCCAATATTGCGGAGGTGATAAATATTCAATGACGGAGAGACTTGTGGGCAACAATTGGATCCGTTTCCTTCTGTGTGTTTGAAGGAGGAGGTGGTGGAGTGACATAATGCAGTGATCCTGTGTGAAAGCTGAAGTCGAGACTTTTATCAGCGGCCCCTGGGAACCTCGCTCTGATCTCCAAACCCAGAGACAGTGACCAAATCTCCAGATGTCAGTAACCAAACCCCCAGCACTCTATGTGTCTCCTTTTCACAGGTGACAGGAATCTGAATCAAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00027341 True 552 lncRNA 0.45 2 24736359 24759440

Neighbor


gene id symbol gene type direction distance location
XLOC_013437 NA coding downstream 174475 24497624 ~ 24561884 (-)
XLOC_013435 si:ch211-147m20.3 coding downstream 259449 24273428 ~ 24476910 (-)
XLOC_013436 CU855551.1 coding downstream 420060 24316181 ~ 24316299 (-)
XLOC_013434 NA coding downstream 652523 24047486 ~ 24083836 (-)
XLOC_013432 nr2f2 coding downstream 713098 23868650 ~ 24023261 (-)
XLOC_013440 chd2 coding upstream 174033 24933473 ~ 24989580 (-)
XLOC_013441 NA coding upstream 230828 24990268 ~ 24997070 (-)
XLOC_013442 st8sia2 coding upstream 268055 25027495 ~ 25051846 (-)
XLOC_013443 slco3a1 coding upstream 314544 25073984 ~ 25177230 (-)
XLOC_013444 BX901968.2 coding upstream 399221 25158661 ~ 25158777 (-)
XLOC_013384 BX323829.1 misc downstream 5194128 19542102 ~ 19542231 (-)
XLOC_013433 NA non-coding downstream 851705 23877479 ~ 23884654 (-)
XLOC_013445 NA non-coding upstream 421099 25180539 ~ 25225436 (-)
XLOC_013448 CR450716.1 non-coding upstream 756453 25515893 ~ 25516631 (-)
XLOC_013450 NA non-coding upstream 937835 25697275 ~ 25745621 (-)

Expression



Co-expression Network