XLOC_013450


Basic Information

Item Value
gene id XLOC_013450
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 25697275 ~ 25745621 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027346
TTTTATTGCAGATATTTGGAATGCATTTGCTTGGCCCTTTTCTCTGTGGGTACATTCTGCTTTGCTTAAGTCGGTGTGCTACCGGCAGAGCTGCCCAAACTGTTCTTTAAACAGTTCAGTGCATTTTTCCCTTCGTCCCTTGGCAGTTCTGCGGAATGTTAGTTTGTGAGACTTGTAGTTAATTTGCAAGTCAGTCGACAGAGCTAGTTCCGTGCGGTCAGGACCACAGATGTGACTAAACTGCCCAATGCCACCACCAGAGCTCCGAGCAGAAACTTCCAAGAAATTCCCTGGAAGAGTAAGAAACAAGATCAAACGACGGAGGGGCTTGGACTCTGGCACATTTTAAAAGGACTCTTCCACCACTCTTATTCCTCTCACTAGGTGGTAATCAGTCACTTACAAACGGCTTCTTTTTGGGAGGAGGTGTCAGAAAGGGCGCAATGTTTTCGCCGAACACTCGAGCTGGTTTAGCTTGCCAGTTCTGGCTCTCATTTTCCCCCGCCTGTCTTTTGACCAGTTTGGAAAGTTCAGCATGAATAGCCTATAAAATACAACATGGACACATGTATGAGCACTTAAAATTATACTCAAAGCAACACAACAGAAGCAATTTTTTTAACCTGGTTTGAACTTTATTGTTTACGGAATAATGCGCTCCCGACGCAGTTTCCAACGCTGACCAAAAGAGAGCGCCATTTCACCGAATTAAAGCCTATTGACGTGCAACTTGGAAACTACTCTGGTTGGTTGTCAGTCGTCTTTCTAAAAGGAACACAACTTCATCTGAAAGACTACTTGAAAAAATGAACAGTCGAGAAGAGGACGTTCTGTGCAATGATGTTCAAAtgacaaaaacatgaaaaaaatcagACAGATGAGTATTATGCTACCTACTAAATTAAATGAATCATCTCTTCTTCAGACAAAGTCTGTCTCCCAGTAACACTACAACCTGTCCCTCATCTTTTGTCAACCATTTCTTTGTCTCTTTCTGTTCCTCTGGCTCAGTGTCTAGGGAAAAAGACTTCGGTATTTTCTAATTCTGACAAAAGAGGATTGAAAATCCTTGTGACAGTAAAGCACAGCTTGCTTCCAGCAGATCTGCCTTTAATGTATGATACTCTGACAAGGAAACGCATGTCATCGAAACAGATATTCATCAAAAATTAATTTCCTTTCTTTTAAAAAGCCAAACCACTTCTTGCTCGCTGCTATAACTTATGAAATCCAGTTAAAAGATAAGAAATCTATCTGCAAAATAACGATCAAAGAAATGTCAACCATATCATTATGAAAATAATTAATCTAGTGGGAATAGTACATTTTGCTCTTGAATCAACCTCTGTGAAAATATCCAACATTTTTATACCTGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027346 True 1376 lncRNA 0.40 2 25697275 25745621

Neighbor

gene id symbol gene type direction distance location
XLOC_013449 si:ch211-13k12.2 coding downstream 50989 25563292 ~ 25646286 (-)
XLOC_013448 CR450716.1 coding downstream 180644 25515893 ~ 25516631 (-)
XLOC_013447 gnrhr4 coding downstream 294560 25391171 ~ 25402715 (-)
XLOC_013446 plin1 coding downstream 417952 25229634 ~ 25279323 (-)
XLOC_013445 NA coding downstream 471839 25180539 ~ 25225436 (-)
XLOC_013451 zgc:162879 coding upstream 9217 25754838 ~ 25771553 (-)
XLOC_013452 sema4ba coding upstream 37825 25783446 ~ 25905623 (-)
XLOC_013453 idh2 coding upstream 351193 26096814 ~ 26101800 (-)
XLOC_013454 CABZ01039782.1 coding upstream 379042 26124663 ~ 26126258 (-)
XLOC_013455 dre-mir-184-1 coding upstream 457682 26203303 ~ 26203389 (-)
XLOC_013384 BX323829.1 misc downstream 6155044 19542102 ~ 19542231 (-)
XLOC_013444 BX901968.2 non-coding downstream 538498 25158661 ~ 25158777 (-)
XLOC_013441 NA non-coding downstream 700205 24990268 ~ 24997070 (-)
XLOC_013439 AL935295.2 non-coding downstream 950874 24741499 ~ 24746401 (-)
XLOC_013456 CR352253.1 non-coding upstream 550544 26296165 ~ 26299843 (-)
XLOC_013467 NA non-coding upstream 1309225 27054846 ~ 27066350 (-)
XLOC_013468 CR936464.1 non-coding upstream 1391244 27136865 ~ 27136982 (-)
XLOC_013469 BX640463.3 non-coding upstream 1561303 27306924 ~ 27307040 (-)
XLOC_013438 NA non-coding downstream 937835 24736359 ~ 24759440 (-)

Expression


Co-expression Network