CI01000339_00387189_00393407


Basic Information

Item Value
gene id CI01000339_00387189_00393407
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 387013 ~ 393407 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_00387189_00393407.mRNA
ATGACCAGGTTTGAGTCCAGACTGTGGTTGGCATCTCTGAGGCAACGATGCCCGCTGGTGCGGATGGCATATGTGGATATAGTGAGGCTGGTTGGCTCTGCTGCATTCCACCAAAGTGCAGTGAACTTTCTGTGTGGGGATCCTGAGTGGTCGTGTCAGGTGTGGCAGAGTCTGGCCAATGGCAACGCAGTAGTAAGGCTCTCATTGGTCAAGTCTGCTATAGAGGGGCATGGTTGGAGAGGAACAGACCTCCAGGAGGTTATTGAGAGAGCAATGCAGGCCAACCTGAAGAAGGCGCTGTTGGACCAGAACGTGGAGTACAGGGGAGCATTCTTGACCACATTAGTTGAGGTTATGACCCCAGAGGAAGAGAGTTGTGCCCTGCCCTCTCCCTGTCCTCCAAGGTTTGAGGAGACATGGCTGCAGGAGTGTGTGGAGGTTCTATTTACTGATCTGGAGTCAGATAGAGGAGGACCTGTGCTGATCTCCACAGCTCTGTGTGCAGTCAGCCTGCTCCTCTCCCAGAGTGTGGACTTGTCTTTGCTCCAGCGCTGGTGTAAGTTATTAGAGAAGCACAGATGCCCTGAAGCTCCTGAGGCACTCAGAATATCCTGTGCTCAGGCTCTGTGTCTGTGTGGCGTCTCCGTGGTGACCAGGAGCCTGACAGACAGCCTTGTGCTCAAAGAGCTCAGTACCAGCTTGATCAACACCGGTATCTACCTGCTTCAGGATGAGAGTCCACAGGTAAGAGCAAAGGCAGCCGTCTTTGCCTCTCTGGTCTGCTGTTCTCGACGACCAGACGCTCCTCAGAGATGCTTCTACATGCAGGTGAACCAGGCTCTGCACTCACTGCTGGACCTGCTCTTGGAAAAATTCTGGGATGCAAGTGGTGCTTTGGAGGCCTTAATGTGCCACTTACCTGACTGTGATCTGAATGTTTTGCTGAAGGAGTCCAAAGAGACACAATGGCGCAGTCTGTATGAGCGCGATGAAGCAAATGTGTTTGCAGAGCCATCTGTGATCTCAGAGTGCCTGTTGCCGTACCTATTGCATCTAGTTAAACATTACCCAGAATCCTCCACTCTCACCAAGAACCTTGAGCACTGGGCCCGAAACAGTGCAGCCATTGTCAAAGAGAATCTCACAATTTGTATGCAACTTCAATTAGGCAATGTCCTGAATCCTGATTGGCTGAGTTTGCTAATAGATCCCCGTTTCCATTGCGCTCTTTATGGCCTGTTCACTAGGGCAATTATACTACTCCAGCTGCTCAAGAAGTGTGATTCCATACAACCCCTACTTGACCCTTTGAGTTTATCTACAGACCTTCAGGATATTCGGAGACGGTTTGTCCTAAATGGAGTCTTCCTTCCTCAGGTCTTCATTGATGCACTAGCACAGACAGATTAATCTAGTGCCGTCACAGATCAGGGTTGCATTATTGCAGTTACAGGCTTAATTAAGCACAAAAAAAGTGTAATCATTATTGATCCGGAAAAGCTGGCTCTGCATCGCCATATTGAGTGCAAACTATTCAAAAAGAAGAATAACAGTCCTTTGTTGTGCAATACAAGAGAGACAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_00387189_00393407.mRNA True 1586 mRNA 0.49 7 387013 393407

Neighbor

gene id symbol gene type direction distance location
CI01000339_00376587_00383412 PIK3IP1 coding downstream 3601 376296 ~ 383412 (-)
CI01000339_00306275_00328002 NA coding downstream 58562 305862 ~ 328451 (-)
CI01000339_00269232_00284617 NA coding downstream 102145 269227 ~ 284868 (-)
CI01000339_00233236_00247333 WSCD2 coding downstream 139380 233166 ~ 247633 (-)
CI01000339_00199870_00204573 NA coding downstream 182377 198630 ~ 204636 (-)
CI01000339_00397469_00403594 NA coding upstream 4062 397469 ~ 403594 (-)
CI01000339_00403686_00405566 NA coding upstream 10279 403686 ~ 405749 (-)
CI01000339_00416204_00453589 CAMK2G, NEWGENE_621802, CAMK2B coding upstream 22044 415451 ~ 453589 (-)
CI01000339_00481035_00496923 NA coding upstream 87097 480504 ~ 497237 (-)
CI01000339_00642674_00732431 TENM1 coding upstream 249267 642674 ~ 732431 (-)
G481032 NA non-coding downstream 530 385660 ~ 386483 (-)
G481102 NA non-coding downstream 56266 330248 ~ 330747 (-)
G481075 NA non-coding downstream 227219 159472 ~ 159794 (-)
G480981 NA non-coding downstream 317569 43865 ~ 69444 (-)
G481124 NA non-coding upstream 81120 474527 ~ 475730 (-)
G481060 NA non-coding upstream 163318 556725 ~ 557127 (-)
G481034 NA non-coding upstream 165972 559379 ~ 563915 (-)
G481051 NA non-coding upstream 176680 570087 ~ 571491 (-)
G481037 NA non-coding upstream 182953 576360 ~ 578178 (-)
G480969 NA other downstream 296816 85093 ~ 90197 (-)
CI01000339_00932339_00951205 SMARCA1 other upstream 555410 931680 ~ 951205 (-)
G481157 NA other upstream 720722 1114129 ~ 1116148 (-)
G481610 NA other upstream 1178130 1571537 ~ 1573962 (-)
G481662 NA other upstream 1330363 1723770 ~ 1733019 (-)
CI01000339_01988812_02024891 NA other upstream 1595768 1988537 ~ 2025183 (-)

Expression


Co-expression Network