CI01000339_00403686_00405566


Basic Information

Item Value
gene id CI01000339_00403686_00405566
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 403686 ~ 405749 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_00403686_00405566.mRNA
AGTCTAATACTGTAGCCATTAGCCACGCACAATAGATTATCATACAGTCGTGCAGATAGGGGGCGCAGGCGTGCGCTAGTCATGCAGCTGACCCTGTATCTCACTGTAGAATGAGATTGATCAGTGGTTCACACATGGAGCTGTGCACAACGTTTTGAGTTGACAAATCTTAAATTCGCAACAATGACGATTATAAACTTTTCTTCGGGGCAAGCTGATGCAGTTATGAAATCTATCGTTTTAGAGGATCAAATATCATCTGATGTCAAAGACACGCTAAGGGTTTTCTTGCAGAAGCTCACAGAAAATGCCAAGAGTACAGGCAAGCGAAGCAGAGAGCGATCACTGGAGGAGGCTTCACAGATCCTACAGAAGATCCCAGAAGAAGCACTTAATTCCTTACAGTCTGCTGCTCTTTACCAGCTTGTCCAGCTTCTTCTGGCCTTACAGTTAGAGGCGGTGACCGTTTCATCTGTCTGCCGCAAATTAGACCAAATTCTGCAGGTCTTGGCTGAAATAAACTACTCCATTGTCTTTGAAGTAGTCACACAATACCTGCTGAAGCTTTTGCACCAAAAACAGGTGTTTACATTAAAAGATCTTCAGATAGCCTGCATGTTTTTGGAGGACAGCACTATGGGACGAGAGGTTCTGAAGACAGAATGCACCACCCTGCTTAGTAAAGTCACTGAGCTGATTCCTGTTGTTATGTCAGATGAAGAAGCCAGAAATGGACCGTTGTGCTACCAAACTGTCAAGGTTTGTTTGCAGGTGTTTCAGCTGCTGCCAGGGCAGGTGGCCCTGTTGGTCTACAGTAAGGATAGTGTAAATATGAGTGTGAGAGAGATTTTGGAGTTCTTGATGGACATTATCTTAGGAGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_00403686_00405566.mRNA True 882 mRNA 0.45 6 403686 405749

Neighbor

gene id symbol gene type direction distance location
CI01000339_00397469_00403594 NA coding downstream 92 397469 ~ 403594 (-)
CI01000339_00387189_00393407 NA coding downstream 10279 387013 ~ 393407 (-)
CI01000339_00376587_00383412 PIK3IP1 coding downstream 20274 376296 ~ 383412 (-)
CI01000339_00306275_00328002 NA coding downstream 75235 305862 ~ 328451 (-)
CI01000339_00269232_00284617 NA coding downstream 118818 269227 ~ 284868 (-)
CI01000339_00416204_00453589 CAMK2G, NEWGENE_621802, CAMK2B coding upstream 9702 415451 ~ 453589 (-)
CI01000339_00481035_00496923 NA coding upstream 74755 480504 ~ 497237 (-)
CI01000339_00642674_00732431 TENM1 coding upstream 236925 642674 ~ 732431 (-)
CI01000339_00761812_00768938 NA coding upstream 356000 761749 ~ 769911 (-)
CI01000339_00932339_00951205 SMARCA1 coding upstream 525931 931680 ~ 951205 (-)
G481032 NA non-coding downstream 17203 385660 ~ 386483 (-)
G481102 NA non-coding downstream 72939 330248 ~ 330747 (-)
CI01000339_00199870_00204573 NA non-coding downstream 190199 198630 ~ 204636 (-)
G481075 NA non-coding downstream 243892 159472 ~ 159794 (-)
G480981 NA non-coding downstream 334242 43865 ~ 69444 (-)
G481124 NA non-coding upstream 68778 474527 ~ 475730 (-)
G481060 NA non-coding upstream 150976 556725 ~ 557127 (-)
G481034 NA non-coding upstream 153630 559379 ~ 563915 (-)
G481051 NA non-coding upstream 164338 570087 ~ 571491 (-)
G481037 NA non-coding upstream 170611 576360 ~ 578178 (-)
G480969 NA other downstream 313489 85093 ~ 90197 (-)
G481157 NA other upstream 708380 1114129 ~ 1116148 (-)
G481610 NA other upstream 1165788 1571537 ~ 1573962 (-)
G481662 NA other upstream 1318021 1723770 ~ 1733019 (-)
CI01000339_01988812_02024891 NA other upstream 1583426 1988537 ~ 2025183 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location