CI01000339_00416204_00453589 (CAMK2G, NEWGENE_621802, CAMK2B)


Basic Information

Item Value
gene id CI01000339_00416204_00453589
gene name CAMK2G, NEWGENE_621802, CAMK2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 415451 ~ 453589 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_00416204_00453589.mRNA
TGTGTGGCGGTTGCTGGTGATAAATTCACTTTCATGAATGTTCAGATTACTTTTATTGCCCAGAGAGTCAGTATAGACATCAGGGTCCCAGTCCCAGACCAGTCATCATGTCCAGCCAAAATTTTTGGTGCATCAATAGATTTTATATGTGTAGGTTTAGATTCATGCTTCAGTTTCAATATAGCAGTTTCCAGAAAAAGAAACAAGCCAGAGAATCTGCTCTTGGCCAGTAAGTGCAAGAATGCCGCTGTGAAGCTGGCTGACTTTGGACTGGCCATTGAGGTGCAGGGAGACCAGCAGGCATGGTTTGGATTTGCAGGGACACCAGGTTATCTGTCCCCTGAGGTGCTGAGGAAGGAGGCATATGGCAAACCGGTGGACATCTGGGCCTGTGGTGTGATTCTGTACATTCTTCTGGTTGGGTATCCACCTTTCTGGGACGAGGATCAGCACAAACTTTACCAACAGATCAAAGCTGGAGCTTATGATTTTCCATCTCCAGAATGGGACACAGTTACTCCTGAAGCCAAAAACCTCATCAATCAAATGCTGACCATAAACCCTGCCAAGAGAATTACTGCACAGGAAGCTCTCAAACACCCATGGGTCTGCCAACGCTCTACTGTGGCTTCCATGATGCACAGACAAGAGACTGTGGAATGCCTGAAGAAGTTCAACGCCAGGAGGAAACTCAAGGGGGCCATCCTCACCACCATGCTTGTGTCACGGAACTTCTCTGCAGCCAAGAGCTTGTTGAACAAAAAAGCAGACGTTAAGAAGCGGAAGTCGAGCTCTACCATTCAGTACATGCCCCAGACAAACAGCACCAAAAACAGCATAGTCACCAGTCCCAAAGGAAACCTCCCCTCTCCTGCACTGGAGGCACAGACCACTGTCATCCATAATGCAGTGGATGGGATTAAGGAGTCGTCGGACAGCAGTAATGCCACAGTGGAGGACGAGGAAATGAAAGCTGCCACTAAGTTCACTGATCTACTGGGTGTGGTTCGTCGGGGCTCTGTGCCCACGTCTGATGGTGAGGGGGGAAGCACTATCACTCCAGTTTCTGCCCCCTCAACTCCCCAGACCCCCAACATTCCCACACAGACACGCAAACAGGAGATCATCAAAATCACAGAACAGCTTATTGAGGCCATCAACAATGGCGACTTTGAAGCCTATGCTAAAATCTGCGACCCTGGACTCACCTGCTTTGAACCTGAGGCCTTGGGAAACCTGGTGGAGGGGATGGACTTCCACAGATTTTACTTTGAGAACTTGCTGTCTAAGAACAGTAAGCCCATCCACACCACCATCCTTAACCCTCACGTGCACCTGATTGGAGAAGAGGCCGCCTGCATTGCCTACATCCGCCTCACGCAGTACGTGGATGGGCAGGGCCGGCCACGCAGCAGCCAATCAGAAGAAACGAGGGTGTGGCATCGCCGCGACTCCAAATGGCAGAATGTCCATTTCCACTGTTCGGGAGCTCCGGCCGCCCCTCTACAGTGAAGGTACATCCTTGTATATACTTATGTAATGTTGTTTAATGGTAGAGACTTTAACAAATGCTCCCTGTGCCTTTAAATAACTACATTTTGTACACTACTCTTCAGAATTTGGGGTCAGAAAGATTTTTAGCAAGGATGCATTAAATTGATCAAAAGTGACAGCAAACATTGTTACAAAATTTTTTATTTCAAATAAATGAAATAAAATAACTTTTAAACTTTCTGTTCATCAAAGAATCTTGAAAAACAATTATCTTGGCTTCCACAAAAATATTAATTAACAACTATTTTCAACTGTGCTTATAATTAGAAATGTTTCTTGAGCAGCAAATCATCACATTAGAATGATTTCTGGAGGATCATGTGACAATGAAGACTGGAGGAATGGCTGCTGAAAATTCAGCTTTGTCATCGCAGAAATAAATGTCATTTTAAAATGTATTCACATAGAAAACAGTTCTTTCAAATGGTAATAATATTTCACAATATTACTGTTTTCACTGTATTTTTGATCAAATAAGTGCAGCCTTGGTGTGCCTAAGAGACTTCTTTCAAAAACATTAAAAAAATCTTGCTGGCCCCAAGCTTTTGAACAGTAGTGTATATAGAGTGATCGGGGCTAGTTGTCTCACTTTTTATTCCAGTAAAATGTTCTTAGGGCAGGTTCATTTTTGAAAGTTCCTTTCTGTATAGGTACATATCTTAAAGTCTTGGCTACATTTAATGCACAATGGCTACCTGCTGTTTAATTAAA

Function

symbol description
camk2b Enables protein homodimerization activity. Involved in protein autophosphorylation and regulation of neuron migration. Part of calcium- and calmodulin-dependent protein kinase complex. Implicated in autosomal dominant mental retardation 54.
camk2g Enables protein homodimerization activity. Involved in regulation of neuron projection development. Located in membrane. Part of calcium- and calmodulin-dependent protein kinase complex. Implicated in autosomal dominant non-syndromic intellectual disability. Biomarker of malignant astrocytoma.

GO:      GO:0005088, GO:0016310, GO:0030154, GO:0000082, GO:1901897, GO:0001666, GO:0046777, GO:0030073, GO:0005654, GO:0030666, GO:0043547, GO:0016020, GO:0000165, GO:0000166, GO:0033017, GO:0004674, GO:0016740, GO:0004672, GO:0005524, GO:0042803, GO:0006468, GO:0016301, GO:0006816, GO:0060333, GO:0014733, GO:0014069, GO:0005886, GO:0006979, GO:0051259, GO:0007399, GO:0004683, GO:1900034, GO:0005829, GO:0051924, GO:0004723, GO:0016529, GO:0006470, GO:0005516, GO:0007275

KEGG:

id description
K04515 CAMK2; calcium/calmodulin-dependent protein kinase (CaM kinase) II

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_00416204_00453589.mRNA True 2265 mRNA 0.44 18 415451 453589

Neighbor

gene id symbol gene type direction distance location
CI01000339_00403686_00405566 NA coding downstream 9702 403686 ~ 405749 (-)
CI01000339_00397469_00403594 NA coding downstream 11857 397469 ~ 403594 (-)
CI01000339_00387189_00393407 NA coding downstream 22044 387013 ~ 393407 (-)
CI01000339_00376587_00383412 PIK3IP1 coding downstream 32039 376296 ~ 383412 (-)
CI01000339_00306275_00328002 NA coding downstream 87000 305862 ~ 328451 (-)
CI01000339_00481035_00496923 NA coding upstream 26915 480504 ~ 497237 (-)
CI01000339_00642674_00732431 TENM1 coding upstream 189085 642674 ~ 732431 (-)
CI01000339_00761812_00768938 NA coding upstream 308160 761749 ~ 769911 (-)
CI01000339_00932339_00951205 SMARCA1 coding upstream 478091 931680 ~ 951205 (-)
CI01000339_00986443_01008656 ARHGEF9A, ARHGEF9 coding upstream 532381 985970 ~ 1008656 (-)
G481032 NA non-coding downstream 28968 385660 ~ 386483 (-)
G481102 NA non-coding downstream 84704 330248 ~ 330747 (-)
CI01000339_00199870_00204573 NA non-coding downstream 201964 198630 ~ 204636 (-)
G481075 NA non-coding downstream 255657 159472 ~ 159794 (-)
G480981 NA non-coding downstream 346007 43865 ~ 69444 (-)
G481124 NA non-coding upstream 20938 474527 ~ 475730 (-)
G481060 NA non-coding upstream 103136 556725 ~ 557127 (-)
G481034 NA non-coding upstream 105790 559379 ~ 563915 (-)
G481051 NA non-coding upstream 116498 570087 ~ 571491 (-)
G481037 NA non-coding upstream 122771 576360 ~ 578178 (-)
G480969 NA other downstream 325254 85093 ~ 90197 (-)
G481157 NA other upstream 660540 1114129 ~ 1116148 (-)
G481610 NA other upstream 1117948 1571537 ~ 1573962 (-)
G481662 NA other upstream 1270181 1723770 ~ 1733019 (-)
CI01000339_01988812_02024891 NA other upstream 1535586 1988537 ~ 2025183 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030978 camk2b1 coding NC_007116.7 CM002889.2 20931252 ~ 21030996 (-)