CI01000339_01738384_01741637 (PLP1B)


Basic Information

Item Value
gene id CI01000339_01738384_01741637
gene name PLP1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 1738110 ~ 1741677 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_01738384_01741637.mRNA
ACCCCAGTGTCAGTGTCAGTGTGTGTCTGTCTGTGCCGCTATGGGTGGAAACGCAATGACGCACTCCACTGCTGCGGCCTGTTGCTATGACTGCTGCATCCGCTGCCTGGGCGCCGTGCCCTACACCAGCCTGCTGGCCACCCTGCTCTGCTACACCGGCGTGGCTCTCTTCTGTGGGGGAGGGCATGAGGCGCTCACTCACACACGTACATTCATAGAGCTCTACTTCGCAAGGGACGTCCAGGATTTCACTGTGCTAGCAGACTTTATAAAATATTTCCAGTATGTGATCTACGGTCTGGCCTCCTTCTTTTTCCTCTATGGATTGTTGCTGTTGGCTGAAGGTTTTTACACCACCAGTGCATTGATAATCCTGACATACATTCTCGCTGTGATCTGGCTGATTGTTTTTGGCTTCACTGCCGTTCCCGTGCTCTTCTTTATTAATATGGAAAGCGCCTGTCACAAAGTCAACATTCTGTCAGAAACCACCTTGTTCAACCAGCAGTCCAGGGTCTGCATGGACGCACGGATGTATGGGTTTCTTCCCTGGAATGCTGTGCCGGGGATTGTTTGTGGAAATACACTGGGCAACATCTGCAAAACACCAGAGTTTTACATGACCTATGACCTTTACATCTGTGCATTTGCTGGAGCAGGAATCACCCTTCTCGCCCTGATCCCAATGACTCTACTCCCTTTTCCTGTGTATTTGGCAGCAGTCATTTCTCAGACTTTATCTAAAGAGAATCATAGAGCACTAACTATCAGGACAGCCCTCTGTCTTGCCAAGGAGCACAGCGAGATTGATACAAACTTGCAATAATATTGTAATAAGTAGAAAATTTCAGTGGCCACAAATGAATTTAGACACATAAGCTACACTTCATTGCATTAGGTATGTGCCATCTGCAAACAATGCGCATTTCATTTGTGAAATGTTTTGTTTGAAAATATGCTTGTGCTATTTTTATAATATATAAGATTTAATTATTTAATTTAATTATAAAAAAACAACTGCATTACCAAACTTTTACAACCTTTTCATAGAAAGAAGTCCTGCATTTTTCCACTATACTGCTCTTGAGATTGTAAATAAA

Function

symbol description
plp1b Predicted to be a structural constituent of myelin sheath. Predicted to be involved in axon development and central nervous system myelination. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in myelin sheath and plasma membrane. Is expressed in nervous system. Human ortholog(s) of this gene implicated in Pelizaeus-Merzbacher disease and hereditary spastic paraplegia 2. Orthologous to human PLP1 (proteolipid protein 1).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_01738384_01741637.mRNA True 1100 mRNA 0.44 7 1738110 1741677

Neighbor

gene id symbol gene type direction distance location
CI01000339_01697846_01701846 NA coding downstream 36124 1697846 ~ 1701986 (-)
CI01000339_01653753_01656488 UPRT, UPP coding downstream 81220 1653429 ~ 1656890 (-)
CI01000339_01525582_01552389 NA coding downstream 185721 1525044 ~ 1552389 (-)
CI01000339_01515719_01522951 APOOL coding downstream 215159 1515416 ~ 1522951 (-)
CI01000339_01394345_01398989 NA coding downstream 339121 1394242 ~ 1398989 (-)
CI01000339_01746556_01761682 NLGN3B coding upstream 4660 1746337 ~ 1761682 (-)
CI01000339_01764768_01765697 NA coding upstream 22414 1764091 ~ 1766227 (-)
CI01000339_01769896_01810664 GRIA3, GRIA3A coding upstream 28139 1769816 ~ 1811582 (-)
CI01000339_01822896_01825557 NA coding upstream 80264 1821941 ~ 1825557 (-)
CI01000339_01827057_01830206 NA coding upstream 85380 1827057 ~ 1830206 (-)
G481686 NA non-coding downstream 25510 1712072 ~ 1712600 (-)
G481664 NA non-coding downstream 61373 1670660 ~ 1676737 (-)
G481677 NA non-coding downstream 68070 1669830 ~ 1670040 (-)
G481646 NA non-coding downstream 133780 1603464 ~ 1604330 (-)
G481609 NA non-coding downstream 160394 1574523 ~ 1577716 (-)
G481688 NA non-coding upstream 8235 1749912 ~ 1750170 (-)
G481689 NA non-coding upstream 12499 1754176 ~ 1754410 (-)
G481690 NA non-coding upstream 13477 1755154 ~ 1755603 (-)
G481691 NA non-coding upstream 20676 1762353 ~ 1762574 (-)
G481698 NA non-coding upstream 213683 1955360 ~ 1955599 (-)
G481662 NA other downstream 5091 1723770 ~ 1733019 (-)
G481610 NA other downstream 164148 1571537 ~ 1573962 (-)
G481157 NA other downstream 621962 1114129 ~ 1116148 (-)
CI01000339_00932339_00951205 SMARCA1 other downstream 784676 931680 ~ 951205 (-)
G480969 NA other downstream 1647913 85093 ~ 90197 (-)
CI01000339_01988812_02024891 NA other upstream 247498 1988537 ~ 2025183 (-)
G483104 NA other upstream 1652431 3394108 ~ 3401228 (-)
G483199 NA other upstream 2036214 3777891 ~ 3778551 (-)
G483285 NA other upstream 2383581 4125258 ~ 4170502 (-)
G483509 NA other upstream 2871175 4612852 ~ 4613318 (-)

Expression


Co-expression Network