XLOC_013467



Basic Information


Item Value
gene id XLOC_013467
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 27054846 ~ 27066350 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00027348
AACTCATCAAATGTGCGGAAAACAAACTGTGGCTCGCTCTGACCTTCCCTTAGAATCCGAATGACATAcgtctaaaaacaaaaaaacataagaaatcagCCAGAGCTCCAAGCAGCTGCACAAGTCGGGTCTGCTTCTCCAGCTCAGCCCTCAGTCCGGTCCCACACAGACACAGCAGCACACAGAGGATCCGCTCATAACGCTGACCAAACGCCGGGTCCTGCACTGCATCCCTCAGCAGCC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00027348 True 243 lncRNA 0.52 2 27054846 27066350

Neighbor


gene id symbol gene type direction distance location
XLOC_013466 rcn2 coding downstream 76906 26967414 ~ 26977940 (-)
XLOC_013465 pstpip1a coding downstream 91373 26930956 ~ 26963473 (-)
XLOC_013464 si:dkey-24l11.2 coding downstream 160076 26863139 ~ 26894770 (-)
XLOC_013463 ch25hl1.1 coding downstream 199887 26853891 ~ 26854959 (-)
XLOC_013462 znf592 coding downstream 242887 26800061 ~ 26811959 (-)
XLOC_013468 CR936464.1 coding upstream 70515 27136865 ~ 27136982 (-)
XLOC_013469 BX640463.3 coding upstream 240574 27306924 ~ 27307040 (-)
XLOC_013470 NA coding upstream 243054 27309404 ~ 27316599 (-)
XLOC_013471 BX640463.1 coding upstream 268591 27334941 ~ 27335059 (-)
XLOC_013472 NA coding upstream 291978 27358328 ~ 27362251 (-)
XLOC_013384 BX323829.1 misc downstream 7512615 19542102 ~ 19542231 (-)
XLOC_013456 CR352253.1 non-coding downstream 755003 26296165 ~ 26299843 (-)
XLOC_013455 dre-mir-184-1 non-coding downstream 851457 26203303 ~ 26203389 (-)
XLOC_013450 NA non-coding downstream 1309225 25697275 ~ 25745621 (-)
XLOC_013448 CR450716.1 non-coding downstream 1538215 25515893 ~ 25516631 (-)
XLOC_013445 NA non-coding downstream 1829410 25180539 ~ 25225436 (-)
XLOC_013474 NA non-coding upstream 614951 27681301 ~ 27682853 (-)

Expression



Co-expression Network