Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000339_04303248_04303541 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 4302943 ~ 4304154 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000339_04303248_04303541.mRNA | False | 1212 | mRNA | 0.38 | 1 | 4302943 | 4304154 |
| TU554663 | True | 397 | lncRNA | 0.40 | 2 | 4303358 | 4303774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_04128125_04129743 | DRD7 | coding | downstream | 173200 | 4127832 ~ 4129743 (-) |
| CI01000339_03872310_03888527 | HTRA4 | coding | downstream | 414416 | 3871712 ~ 3888527 (-) |
| CI01000339_03848230_03850745 | LMAN2LB | coding | downstream | 451456 | 3848197 ~ 3851487 (-) |
| CI01000339_03832789_03834539 | NA | coding | downstream | 468404 | 3832032 ~ 3834539 (-) |
| CI01000339_03806022_03809529 | NA | coding | downstream | 493271 | 3805764 ~ 3809672 (-) |
| CI01000339_04347010_04347312 | CLG1H8ORF4, C21H8ORF4, CLG13H8ORF4 | coding | upstream | 41799 | 4345953 ~ 4347394 (-) |
| CI01000339_04388819_04415624 | PPP3CCA, PPP3CCB, PPP3CC, PP2BC | coding | upstream | 84238 | 4388392 ~ 4415624 (-) |
| CI01000339_04428882_04435809 | NA | coding | upstream | 124634 | 4428788 ~ 4435809 (-) |
| CI01000339_04441515_04447089 | ABCB9 | coding | upstream | 137212 | 4441366 ~ 4447089 (-) |
| CI01000339_04449553_04451937 | NA | coding | upstream | 144823 | 4448977 ~ 4451937 (-) |
| G483365 | NA | non-coding | downstream | 24531 | 4277691 ~ 4278412 (-) |
| G483366 | NA | non-coding | downstream | 68044 | 4217372 ~ 4234899 (-) |
| G483360 | NA | non-coding | downstream | 100731 | 4201984 ~ 4202212 (-) |
| G483359 | NA | non-coding | downstream | 101893 | 4200816 ~ 4201050 (-) |
| G483358 | NA | non-coding | downstream | 103747 | 4198899 ~ 4199196 (-) |
| G483429 | NA | non-coding | upstream | 65698 | 4369852 ~ 4370137 (-) |
| G483431 | NA | non-coding | upstream | 66888 | 4371042 ~ 4371261 (-) |
| G483442 | NA | non-coding | upstream | 172763 | 4476917 ~ 4477170 (-) |
| G483443 | NA | non-coding | upstream | 174110 | 4478264 ~ 4478485 (-) |
| G483444 | NA | non-coding | upstream | 184769 | 4488923 ~ 4489161 (-) |
| G483285 | NA | other | downstream | 132441 | 4125258 ~ 4170502 (-) |
| G483199 | NA | other | downstream | 524392 | 3777891 ~ 3778551 (-) |
| G483104 | NA | other | downstream | 889952 | 3394108 ~ 3401228 (-) |
| CI01000339_01988812_02024891 | NA | other | downstream | 2305498 | 1988537 ~ 2025183 (-) |
| G481662 | NA | other | downstream | 2569924 | 1723770 ~ 1733019 (-) |
| G483509 | NA | other | upstream | 308698 | 4612852 ~ 4613318 (-) |
| G483512 | NA | other | upstream | 313958 | 4618112 ~ 4618725 (-) |
| G483481 | NA | other | upstream | 547603 | 4851757 ~ 4853447 (-) |
| G484394 | NA | other | upstream | 952413 | 5274086 ~ 5274270 (-) |
| G484702 | NA | other | upstream | 1719578 | 6021828 ~ 6024822 (-) |
