CI01000339_05022538_05028211


Basic Information

Item Value
gene id CI01000339_05022538_05028211
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 5022538 ~ 5028211 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_05022538_05028211.mRNA
AGGGCCATGCTGTACATAGAGTTGATCAGGTTGTGGGATGAGGCCGTGCGGACAATAGACAGCCGGGACTGGCAGGGCGCTCTCACTATACTAAACCAGATCACAGATCACAACTGTCGCACTATGTTTGTGGTCGCGTCAACACACATCGCCCTGGGTCAGGTGGATTTGGCCATCAAGGCTCTCGACCAGGTAATCGCAAAGGATTCATGTCTTGCTGTGGGATTTTTTCAGAGGTCTGCTGTTCATATGATGGCAAACAGGCTGGAGGAGGCACTGTCTGATTGTATATCGGCTCAGAAATACATGAGGGAAAACCCTGTCATTGACTACAAACAGCTGGGTCTTCGCTATAAAATGTACAGCTGGCAGGTCCTTTATAATGCAGCAGCCGTTCACTCTAGACTGCAACAATGGGACAAAGCCAGCAATATTTTGCTGGCGGCCTCACAGGAGAGAGGAGCTGGCCGAAGCAACCTAATAGACACAGCTCTAGAGGCTATTTATAGGAGAGAGGTTTTGGAGCCTCTCCTGGTGCCCGAGGGTGAAGTGTTCCGTCCCAGGAAACAGGAAGTAGACCAGCTTAAACCGAGGGACTTCTTGGGTGAAGCAAAGGTCATCACTTCTTTAATTCCAAATGATGACTTCAGGGGCTTTGATCCTCTCAGACCACAGAAACCAGGGTACTATGAGCCAAAGGTCATTGACGGCCAGGACTCTCGTTACATGGTAATGAAGAGTGCTTATGTGGCAAAAGGGGCAGGGGAGCTAACAGTGCCTGCTGGAGCAGAAGTGTTTGTGTATAGTGATGAAGACAAGGATGGGCTGGCAGTAGTCATTTATGATGGAAAGAGAGGTCTGGTTCCCAATTTCCTGCTTGAACCAATGGGCAAGAAAAACAAGGCTAAATACAAGCGAATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_05022538_05028211.mRNA True 921 mRNA 0.49 9 5022538 5028211

Neighbor

gene id symbol gene type direction distance location
CI01000339_05009812_05012651 NA coding downstream 8375 5009768 ~ 5014163 (-)
CI01000339_04955181_04994715 NA coding downstream 27703 4954865 ~ 4994835 (-)
CI01000339_04915744_04930094 FAM129BB coding downstream 92444 4915744 ~ 4930094 (-)
CI01000339_04889425_04898489 NPDC1B coding downstream 124049 4889200 ~ 4898489 (-)
CI01000339_04841245_04848286 TRAF2A coding downstream 174252 4840259 ~ 4848286 (-)
CI01000339_05038610_05044559 MAN1B1, MAN1B1B coding upstream 10080 5038291 ~ 5044559 (-)
CI01000339_05046629_05063011 NA coding upstream 17666 5045877 ~ 5063011 (-)
CI01000339_05096677_05210034 CACNA1BA coding upstream 68466 5096677 ~ 5210034 (-)
CI01000339_05212333_05226259 EHMT1A coding upstream 183601 5211812 ~ 5226259 (-)
CI01000339_05228715_05234656 NA coding upstream 200207 5228418 ~ 5234656 (-)
G483614 NA non-coding downstream 111725 4904837 ~ 4910813 (-)
G483480 NA non-coding downstream 140795 4880528 ~ 4881743 (-)
G483610 NA non-coding downstream 142983 4879340 ~ 4879555 (-)
G483609 NA non-coding downstream 143287 4878706 ~ 4879251 (-)
G483493 NA non-coding downstream 188474 4827554 ~ 4834064 (-)
G484405 NA non-coding upstream 148942 5177153 ~ 5177568 (-)
CI01000339_05286494_05309122 GRIN1 non-coding upstream 166782 5286050 ~ 5309342 (-)
CI01000339_05254264_05259467 NA non-coding upstream 227760 5254264 ~ 5259654 (-)
G484436 NA non-coding upstream 332705 5360916 ~ 5361470 (-)
G484452 NA non-coding upstream 361558 5389769 ~ 5389979 (-)
G483481 NA other downstream 169091 4851757 ~ 4853447 (-)
G483512 NA other downstream 403813 4618112 ~ 4618725 (-)
G483509 NA other downstream 409220 4612852 ~ 4613318 (-)
G483285 NA other downstream 852036 4125258 ~ 4170502 (-)
G483199 NA other downstream 1243987 3777891 ~ 3778551 (-)
G484394 NA other upstream 228356 5274086 ~ 5274270 (-)
G484702 NA other upstream 995521 6021828 ~ 6024822 (-)
G484645 NA other upstream 1226120 6254331 ~ 6256112 (-)
G484826 NA other upstream 1972682 7000893 ~ 7004773 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location