CI01000339_05238728_05239733



Basic Information


Item Value
gene id CI01000339_05238728_05239733
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 5238256 ~ 5239733 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000339_05238728_05239733.mRNA
CAGCAATGTGAGCCAAGAGGCCACATGTTCTCCTGAGCCTGAGCACGTGTCTCTGGCTGTGATCCTCTGTCTCGTCTATCTGCTGGGCCTCCTGCTCAACGGATTCAGCCTGTGGGTCTTCACCTGTCGCATTCACAAATGGAACTCTGGAACCGTTCTGCAATTCAATCTGGCTCTAGCTGATGCCATCGTTTCTCCACTCACCCCACTGATGGCAGTGTACTTCGCCATGGATAGCAACTGGATTTTTGGGAGATTCACCTGCCAGCTGAAGATTGCCGTGCTCAGCGTCCACTTCAATGGCAGTGTGATCTTCCTCACGCTCATTAGCATTCATCGCTATATGACCGTGGTTCACTTCACCCGCTCCTCGTTGATGAAAAGGAAGACTTTCGTGAAGAAGCTGTGTGCTGGGATTTGGTGTTTTCTGATAATACTTGGCATTATTTATGGATGGCTGCTTCCTGTAACCACTGAGGAAAATCATCGGCAGTGTCTTACTATTCATCAGGAAAAACTGGCAGATGCTTATTTTATTATTAACTTTGTGATTTTCTTCTTTTGGTGTATTTTACCCTTATCGATATCAGTGTTTTGCTACAGTCGCCTGGCAAGCTCAGTGACCCGCATTAACATAAACTCTGTTCAGGGCCAGTTGGTCAAGAACAAATCCTTGAAGATGATAGGGATATGTCTGGTCATATTTGGCCTTTGCTTTCTTCCTCTCAATGTTGTTCGGACCATCGGAGTAGTCGTGAAAAAGTATTACCCTAAGAAATGCATGCTTCTGTTGCGGTTGCAAACAGCATATTATGTATGCTATATACTGGCAGGAATCAACTGCTGCTTGGACCCCCTAATCTACTTTTTTGGATCACATAATTTTATGACAGCAGTCAGATCATCTCTTAGGGTTATAGGGGTTAAACGCAATGTTGAAAACAAAACTGAATCAGAAACATTAAGTCAAACTGGAAACAGACATGTAATTTTTACTGTCTCTTAGGGCATTTTAAAGTCAGCATTAAACAGAATTTGTGATCATATTTTCATCCCTATTATAACGTGAAACGGCTTCTCGATTGAGGAAAAAATGTAGGGGGACTTGATTTTGACCATCTGGAATTGATTGGATGGTTGTGGTTTCTATTGTTGTGATCTCATGTGAATGAAAGGTGGTCCTGCCCTTGTGCCAGTAAACAGAGAAGAGAAGCAAGGAGTTCTTTTGTTTAAAGATTATGAGGGCACATAAAAATAATAATAATGATGTGCATAAATTTATTACTGTTTTAAGAAATAAGAATTGTCCATTTTCATTTCATGGTGACTTTAATGGTGTTAAGTATCCTATTGCAAGATTACGGTTACAAAATATTTTTGTCTTTAAAATCAGCACAATCAGTGAATTTGACACTGTTACTGTGGCCTCCACTGTCTTTTTCTGCTGACAACACTGCACTAAACTGTAATGCATTAAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000339_05238728_05239733.mRNA True 1478 mRNA 0.41 1 5238256 5239733

Neighbor


gene id symbol gene type direction distance location
CI01000339_05236618_05236983 NA coding downstream 1273 5236500 ~ 5236983 (-)
CI01000339_05228715_05234656 NA coding downstream 3600 5228418 ~ 5234656 (-)
CI01000339_05212333_05226259 EHMT1A coding downstream 11997 5211812 ~ 5226259 (-)
CI01000339_05096677_05210034 CACNA1BA coding downstream 28222 5096677 ~ 5210034 (-)
CI01000339_05046629_05063011 NA coding downstream 175245 5045877 ~ 5063011 (-)
CI01000339_05240700_05241683 NA coding upstream 585 5240318 ~ 5241683 (-)
CI01000339_05245266_05252163 NELFB coding upstream 5210 5244943 ~ 5252163 (-)
CI01000339_05254264_05259467 NA coding upstream 14531 5254264 ~ 5259654 (-)
CI01000339_05264265_05270065 ENTPD2A.2, ENTPD2A.1, ENTPD2 coding upstream 24532 5264265 ~ 5270104 (-)
CI01000339_05286494_05309122 GRIN1 coding upstream 46317 5286050 ~ 5309342 (-)
G484405 NA non-coding downstream 60688 5177153 ~ 5177568 (-)
G483614 NA non-coding downstream 327443 4904837 ~ 4910813 (-)
G483480 NA non-coding downstream 356513 4880528 ~ 4881743 (-)
G483610 NA non-coding downstream 358701 4879340 ~ 4879555 (-)
G483609 NA non-coding downstream 359005 4878706 ~ 4879251 (-)
G484436 NA non-coding upstream 121183 5360916 ~ 5361470 (-)
G484452 NA non-coding upstream 150036 5389769 ~ 5389979 (-)
G484458 NA non-coding upstream 165597 5405330 ~ 5405546 (-)
G484459 NA non-coding upstream 172739 5412472 ~ 5412768 (-)
G483481 NA other downstream 384809 4851757 ~ 4853447 (-)
G483512 NA other downstream 619531 4618112 ~ 4618725 (-)
G483509 NA other downstream 624938 4612852 ~ 4613318 (-)
G483285 NA other downstream 1067754 4125258 ~ 4170502 (-)
G483199 NA other downstream 1459705 3777891 ~ 3778551 (-)
G484394 NA other upstream 16834 5274086 ~ 5274270 (-)
G484702 NA other upstream 783999 6021828 ~ 6024822 (-)
G484645 NA other upstream 1014598 6254331 ~ 6256112 (-)
G484826 NA other upstream 1761160 7000893 ~ 7004773 (-)

Expression



Co-expression Network