XLOC_013476 (iqcg)


Basic Information

Item Value
gene id XLOC_013476
gene name iqcg
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 27843776 ~ 27897217 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026586
CAGACTCTGCTTGCTTCTGACAACCTGGCCAAAGTGCAGAAAGACAGGCAGTTTGTATCAGATGTGATCAATGCTTTATTGGAGGAGCTGCAGAAGAAAAACAATTTTCAGAGTCTCTTTTCTGCAGTGGCAGAGGAACGGAAGAAGAAAGCTGAGCTTCTTGACATAATAAACAGGGAGGAAGAAGGTCGTCGCCAGATTAAAAAACTGCAAAAGCAGTTACTTGACATTCGCAAAGAAAAAACAGAGGAGTGTGAGAGGCTTGAGGAAGAGGTGGCCATCCTAAAAGACCAGGTACAGGACATGAGGGTGAGGACAAACCAACAAGGGAAATTTGTGAAGAGCTGTGCTGAACAGCTGGTCTACCAGGAATCAAAGCACAACAGTTACAAAGAGAATGAACTAGAAGATGAAGTTAAGATGCTTCAAGAGAAAATTGAGGAGGAAAAGAATGTCCACTTTGAAACAGAGGCCTTcctaaaacaacaacatgcaAACTTAAAGCAGAAGTTACAGTATTGGATCCATCGTTATGAAAAGGACATGGAGGAGAAGGAGCAAGAAATCACTGCTCTGCAGAATAAAAGAAACAGCAGCCAGACACGAATTCAAGACCTATCTAAAAAGtgcaaagACATGGAGAATGTTGTCATTGAAGACAGGATAGAGAAGGAGCATTTACGAGCCCAGATGGAGAAAGAGCAGAGGGAAAAAAATGCAGCAACAAAGATCCAGGCCTGGTGGCGGGGGACTCTTGTTCGCAAAGGACCACGTTCCAAGAAAGCAGATAAATCCAAGAAAAAAGATGGGAAAAAGGGCAAAAAGAAGAGGAAGTAATGACTGTCACAACAAACATTTTAGTGgcagtaaatacataaataaataaataaataaataaataaatatttatgcacataaattaaaaaataataataataattatcatttggAATATAATTGTATGAttag
>TCONS_00026587
CGGACGCTGTTGCTACAGCTGCACGTGTAGCGTCTTCTTCACGGCTGATTTGCCTCTTTGTTTAGAAGGATTAAAAGAAAGaaaccttttaattttatttatatatttatctaaatTTCTATATAGCCCAAATCAGCAGTATGACGTCCGTGGAGGAGCTCAGAGCGTGTGCTTTGCTGCAGGATTGCGCTGATCAGCTGTCAGTGTTAGGAAATATTATACGCCCCGGAGCGGAGACTCAGCAAAGGACCGAACTGCATCTAAAAACAGCTCAACTGATGGCTGGAAGCAGTTTGTCAAATTTCTCAGGAGAACTCAAATCCCAAAAGCACTTCAAAATTCAGCAGACTCTGCTTGCTTCTGACAACCTGGCCAAAGTGCAGAAAGACAGGCAGTTTGTATCAGATGTGATCAATGCTTTATTGGAGGAGCTGCAGAAGAAAAACAATTTTCAGAGTCTCTTTTCTGCAGTGGCAGAGGAACGGAAGAAGAAAGCTGAGCTTCTTGACATAATAAACAGGGAGGAAGAAGGTCGTCGCCAGATTAAAAAACTGCAAAAGCAGTTACTTGACATTCGCAAAGAAAAAACAGAGGAGTGTGAGAGGCTTGAGGAAGAGGTGGCCATCCTAAAAGACCAGGTACAGGACATGAGGGTGAGGACAAACCAACAAGGGAAATTTGTGAAGAGCTGTGCTGAACAGCTGGTCTACCAGGAATCAAAGCACAACAGTTACAAAGAGAATGAACTAGAAGATGAAGTTAAGATGCTTCAAGAGAAAATTGAGGAGGAAAAGAATGTCCACTTTGAAACAGAGGCCTTcctaaaacaacaacatgcaAACTTAAAGCAGAAGTTACAGTATTGGATCCATCGTTATGAAAAGGACATGGAGGAGAAGGAGCAAGAAATCACTGCTCTGCAGAATAAAAGAAACAGCAGCCAGACACGAATTCAAGACCTATCTAAAAAGtgcaaagACATGGAGAATGTTGTCATTGAAGACAGGATAGAGAAGGAGCATTTACGAGCCCAGATGGAGAAAGAGCAGAGGGAAAAAAATGCAGCAACAAAGATCCAGGCCTGGTGGCGGGGGACTCTTGTTCGCAAAGGACCACGTTCCAAGAAAGCAGATAAATCCAAGAAAAAAGATGGGAAAAAGGGCAAAAAGAAGAGGAAGTAATGACTGTCACAACAAACATTTTAGTGgcagtaaatacataaataaataaataaataaataaataaata

Function

symbol description
iqcg Predicted to enable calmodulin binding activity. Acts upstream of or within definitive hemopoiesis. Located in motile cilium. Is expressed in blastomere; brain; and pleuroperitoneal region. Orthologous to human IQCG (IQ motif containing G).

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0007288 sperm axoneme assembly biological_process
GO:0044782 cilium organization biological_process
GO:0060216 definitive hemopoiesis biological_process
GO:0031514 motile cilium cellular_component
GO:0042995 cell projection cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0036126 sperm flagellum cellular_component
GO:0005929 cilium cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005516 calmodulin binding molecular_function

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

ZFIN:

id description
ZDB-GENE-050419-109 Predicted to enable calmodulin binding activity. Acts upstream of or within definitive hemopoiesis. Located in motile cilium. Is expressed in blastomere; brain; and pleuroperitoneal region. Orthologous to human IQCG (IQ motif containing G).

Ensembl:

ensembl_id ENSDARG00000068678

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026586 False 969 mRNA 0.39 8 27843776 27858123
TCONS_00026587 True 1249 mRNA 0.42 9 27843840 27897217

Neighbor

gene id symbol gene type direction distance location
XLOC_013475 NA coding downstream 23824 27802551 ~ 27819952 (-)
XLOC_013474 NA coding downstream 160923 27681301 ~ 27682853 (-)
XLOC_013473 BX005470.1 coding downstream 214992 27590442 ~ 27628784 (-)
XLOC_013472 NA coding downstream 481525 27358328 ~ 27362251 (-)
XLOC_013471 BX640463.1 coding downstream 508717 27334941 ~ 27335059 (-)
XLOC_013477 NA coding upstream 307127 28204344 ~ 28221748 (-)
XLOC_013478 NA coding upstream 423513 28320730 ~ 28324155 (-)
XLOC_013479 NA coding upstream 704376 28601593 ~ 28603115 (-)
XLOC_013480 CR388161.1 coding upstream 898342 28795559 ~ 28795675 (-)
XLOC_013481 si:ch211-174j14.2 coding upstream 1039844 28937061 ~ 28938912 (-)
XLOC_013384 BX323829.1 misc downstream 8301545 19542102 ~ 19542231 (-)
XLOC_013469 BX640463.3 non-coding downstream 536736 27306924 ~ 27307040 (-)
XLOC_013482 LO018677.1 non-coding upstream 1187841 29085058 ~ 29085174 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000028_07885954_07890507 NA coding CI01000028 null 7884624 ~ 7890507 (-)