CI01000339_06867675_06873093


Basic Information

Item Value
gene id CI01000339_06867675_06873093
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 6867205 ~ 6873093 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_06867675_06873093.mRNA
ATGGCCAAGAACACGCTGTCTTCGCGCTTCAGAAAGGTGGACATTGATGAATTCGACGAGAATAAATTCGTGGACGATCACGATGAGGCTGCAGACCAGCAAGGACCCGATGCGGTGGAAGTCGACAACCTTATCAGGCAATATCCTTTAATAATGAAGTATACAGAGCACAGATTGCACGACTGCTTGAAATACGCCATCTTTTCATTCCCTCAGGAAAGAGCTCAGACTGTGGTATTGAGGGTGCTGACATCATTTAGGAGCAGCGATATAGAGCCTGCTGTTAAATCTCTCGACAAGAATGGAGTCGATCTTCTCATGAAGTATATCTACAAAGGCTTTGAGAGGCCTGTAGAAAATAGCAGTGCCATATTGCTGCAGTGGCATGAAAAGCCAGGAAGACTGTATGACTACCTGAGCAGACCTGGAAACAATATCGCTAAGAGACGCAGAGGACATGAGGCAGGTTTGCCTGTTACTTAAAGGAAAGAACATGAGGCCATCGTTTTGAATGCTACTGCCTTGAAAAAAAAACTGAACTGTAAACAGTAGAGAAACACCAAAGCACTTGTTTCAAACTGAAAAAATATGCTTGTGTAAAAGTGAAGTAACATTCATGTCAATATATCATAAATTATTCTATGATATACTGGCATCAAAAAGATTTCAGTCACACATGGTTTTTTGAGGGGAAGACAAAACAATCCCGGTGTACATGCTATGGGGAACATGGTGAATACAGATCAGGTGACTGTGAGCAGCAAAAGTGAGTCAGTCCATATGAGGTTGTTATTTGATTAGTTAGATTTAATCAATGTTTTATTTTCTTATTTTATTTCACATCTTTGGTCCCATACTCCTTTTTGTTTTTGTGCAAAGATTTAATAATGGAACCAGTGATGTACACCAAAGGGGTAGAGTGGGGATCGTTGTAAAGTGCCTGCTACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_06867675_06873093.mRNA True 953 mRNA 0.41 3 6867205 6873093

Neighbor

gene id symbol gene type direction distance location
CI01000339_06779978_06786701 SVOP coding downstream 80504 6779844 ~ 6786701 (-)
CI01000339_06770289_06776849 SSH1B, SSH1 coding downstream 90356 6770085 ~ 6776849 (-)
CI01000339_06753621_06757973 CORO1CB, CORO1C, CORO1CA, COR1C coding downstream 109232 6752018 ~ 6757973 (-)
CI01000339_06747841_06748719 NA coding downstream 117384 6747288 ~ 6749821 (-)
CI01000339_06736326_06742993 PKN3 coding downstream 124212 6735893 ~ 6742993 (-)
CI01000339_06883625_06889375 CABP7, CABP7B coding upstream 9962 6883055 ~ 6890499 (-)
CI01000339_06917949_06919576 NA coding upstream 44102 6917195 ~ 6919576 (-)
CI01000339_06946465_06948712 MYHZ2 coding upstream 73308 6946401 ~ 6949328 (-)
CI01000339_06968980_06974513 MYHZ1.1, MYHZ1.2, MYHM86-1, MYHC4, MYHB, MYHZ2 coding upstream 95887 6968980 ~ 6974513 (-)
CI01000339_06983086_06984033 NA coding upstream 109439 6982532 ~ 6984033 (-)
G484943 NA non-coding downstream 50142 6815204 ~ 6817063 (-)
G484870 NA non-coding downstream 133026 6733772 ~ 6734179 (-)
CI01000339_06655858_06658182 DPM2 non-coding downstream 209687 6655294 ~ 6658182 (-)
G484804 NA non-coding downstream 375288 6491716 ~ 6491917 (-)
G484801 NA non-coding downstream 382349 6484622 ~ 6484856 (-)
G484871 NA non-coding upstream 124718 6997811 ~ 6998975 (-)
G484826 NA non-coding upstream 127800 7000893 ~ 7004773 (-)
G484991 NA non-coding upstream 215928 7089021 ~ 7089385 (-)
G485000 NA non-coding upstream 250732 7123825 ~ 7124186 (-)
G484854 NA non-coding upstream 309126 7182219 ~ 7312927 (-)
G484645 NA other downstream 611093 6254331 ~ 6256112 (-)
G484702 NA other downstream 842383 6021828 ~ 6024822 (-)
G484394 NA other downstream 1592935 5274086 ~ 5274270 (-)
G483481 NA other downstream 2013758 4851757 ~ 4853447 (-)
G483512 NA other downstream 2248480 4618112 ~ 4618725 (-)

Expression


Co-expression Network