CI01000339_06983086_06984033


Basic Information

Item Value
gene id CI01000339_06983086_06984033
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 6982532 ~ 6984033 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_06983086_06984033.mRNA
ATGGTAGCTGGGACCCTCTTCAGGAGAGAAACCTTTTCAACCAAAACACTGACCTCCCCTGTTTCCTTGAACCAGATGAGCTCTTTGTGCATGGAGATTCCTTCTAAATCTGAAGGACGGGTTTCTGAATCTGTGTGTGAACAAATGAAAGGACCGCAAAACTGGAAAGTCTGTCTAGATGTCAGTCCATTTTCTCCAAAGGATATAAGCATCAAAACCAAGGAGGGGCTTCCAGCTGACTTAGACCTAAAACTAATCAGCTCCATGCTGTCTCCAGATGGTATTCTCTCAGTTGAGGTCCCATTACCTGGCTCTAATATCAGTCTCCCTGGAGAGATTGTCATCCCTGTTCACATGATGGACAAACAGTTCCCTGCAAAGTAACATATAGACCTATTCATATGCCCAATATGTTAAAAGTAATGAACGTGTTTTCCTAACTTTTCATTTTTGATGGCTAACCTTAGAAGCATTTGTAAATACCAGTATTGCAAGAGAATATTTATCATATTTTGAAGCATTACTAAATGACAAACATTACTGTTCAGACAGTAATATGCTAAATAGTTAAGCTCTGCTGTTACTTTGGTTTAAATTATATGTAATACATAATTTGTGCTTTATATGTATAATAATTCGGTTGCACTTTAGAGTATGTGCACTTACATGTACTTACAGTGTACTACCTAAGAAAGTACTGGTTAATATAAGGTAACTACATGGTTTAAGGTTAGGTTTAGGGGGTAGGTTCAGGGCTAGTACCTAGTTATTACCCATTTATTATAATAAGTACATAGTATGTACATGGGGAACATGACTGTAAAATAAAGTGCTACCAAGAATTCTTCTAAGATGATCAATCCTATGTAACCATTAAGTACTGACGGACTAAAGAGAGATCAGATTTTCCAGTTCACTCTTTTTCAGGCTAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_06983086_06984033.mRNA True 938 mRNA 0.37 3 6982532 6984033

Neighbor

gene id symbol gene type direction distance location
CI01000339_06968980_06974513 MYHZ1.1, MYHZ1.2, MYHM86-1, MYHC4, MYHB, MYHZ2 coding downstream 8019 6968980 ~ 6974513 (-)
CI01000339_06946465_06948712 MYHZ2 coding downstream 33204 6946401 ~ 6949328 (-)
CI01000339_06917949_06919576 NA coding downstream 62956 6917195 ~ 6919576 (-)
CI01000339_06883625_06889375 CABP7, CABP7B coding downstream 92033 6883055 ~ 6890499 (-)
CI01000339_06867675_06873093 NA coding downstream 109439 6867205 ~ 6873093 (-)
CI01000339_06985199_06992207 NA coding upstream 1070 6985103 ~ 6992425 (-)
CI01000339_07009961_07010749 NA coding upstream 25861 7009894 ~ 7011602 (-)
CI01000339_07023718_07029434 FBXW2 coding upstream 38219 7022252 ~ 7029434 (-)
CI01000339_07035942_07039033 MGC78985, NCS1A, NCS1B, NCS1.L, NCS1 coding upstream 51909 7035942 ~ 7039033 (-)
CI01000339_07062220_07073959 NA coding upstream 76848 7060881 ~ 7073959 (-)
G484943 NA non-coding downstream 165469 6815204 ~ 6817063 (-)
G484870 NA non-coding downstream 248353 6733772 ~ 6734179 (-)
CI01000339_06655858_06658182 DPM2 non-coding downstream 325014 6655294 ~ 6658182 (-)
G484804 NA non-coding downstream 490615 6491716 ~ 6491917 (-)
G484801 NA non-coding downstream 497676 6484622 ~ 6484856 (-)
G484871 NA non-coding upstream 13778 6997811 ~ 6998975 (-)
G484826 NA non-coding upstream 16860 7000893 ~ 7004773 (-)
G484991 NA non-coding upstream 104988 7089021 ~ 7089385 (-)
G485000 NA non-coding upstream 139792 7123825 ~ 7124186 (-)
G484854 NA non-coding upstream 198186 7182219 ~ 7312927 (-)
G484645 NA other downstream 726420 6254331 ~ 6256112 (-)
G484702 NA other downstream 957710 6021828 ~ 6024822 (-)
G484394 NA other downstream 1708262 5274086 ~ 5274270 (-)
G483481 NA other downstream 2129085 4851757 ~ 4853447 (-)
G483512 NA other downstream 2363807 4618112 ~ 4618725 (-)

Expression


Co-expression Network