Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000339_07331830_07342029 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 7331553 ~ 7342219 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000339_07331830_07342029.mRNA | False | 756 | mRNA | 0.39 | 3 | 7331553 | 7342208 |
| TU556590 | False | 701 | lncRNA | 0.39 | 1 | 7334451 | 7335151 |
| TU556595 | True | 321 | lncRNA | 0.44 | 1 | 7341899 | 7342219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_07323037_07323778 | NA | coding | downstream | 7320 | 7322664 ~ 7324233 (-) |
| CI01000339_07293147_07293732 | POLE3 | coding | downstream | 36707 | 7292587 ~ 7294846 (-) |
| CI01000339_07277428_07288530 | LRSAM1 | coding | downstream | 43023 | 7277268 ~ 7288530 (-) |
| CI01000339_07241105_07251176 | PTPA, PPP2R4 | coding | downstream | 80377 | 7241094 ~ 7251176 (-) |
| CI01000339_07082365_07085238 | NTMT1 | coding | downstream | 246184 | 7081556 ~ 7085369 (-) |
| CI01000339_07374562_07376423 | MGC53997, TUBB4B, TUBB4A, TUBB, TUBB4B.L, TBB2C, TUBB2B | coding | upstream | 32208 | 7374416 ~ 7376722 (-) |
| CI01000339_07382447_07388182 | GLIPR2 | coding | upstream | 40239 | 7382447 ~ 7388182 (-) |
| CI01000339_07465773_07468005 | NA | coding | upstream | 122750 | 7464958 ~ 7468005 (-) |
| CI01000339_07476878_07484928 | KANK1B | coding | upstream | 134217 | 7476425 ~ 7485545 (-) |
| CI01000339_07490392_07498831 | PRKAA1 | coding | upstream | 147893 | 7490101 ~ 7498831 (-) |
| G485034 | NA | non-coding | downstream | 1395 | 7329298 ~ 7330158 (-) |
| G484854 | NA | non-coding | downstream | 18626 | 7182219 ~ 7312927 (-) |
| G485011 | NA | non-coding | downstream | 60611 | 7267969 ~ 7270942 (-) |
| G484850 | NA | non-coding | downstream | 74567 | 7253329 ~ 7256986 (-) |
| G485045 | NA | non-coding | upstream | 9282 | 7351490 ~ 7351698 (-) |
| G485056 | NA | non-coding | upstream | 35380 | 7377588 ~ 7377820 (-) |
| G485079 | NA | non-coding | upstream | 104674 | 7446882 ~ 7447447 (-) |
| G485309 | NA | non-coding | upstream | 614164 | 7956372 ~ 7956640 (-) |
| G485273 | NA | non-coding | upstream | 619981 | 7962189 ~ 7964635 (-) |
| G484826 | NA | other | downstream | 326780 | 7000893 ~ 7004773 (-) |
| G484645 | NA | other | downstream | 1075441 | 6254331 ~ 6256112 (-) |
| G484702 | NA | other | downstream | 1306731 | 6021828 ~ 6024822 (-) |
| G484394 | NA | other | downstream | 2057283 | 5274086 ~ 5274270 (-) |
| G483481 | NA | other | downstream | 2478106 | 4851757 ~ 4853447 (-) |
| G485035 | NA | non-coding | downstream | 177 | 7333527 ~ 7334274 (-) |
