XLOC_013495


Basic Information

Item Value
gene id XLOC_013495
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 30960172 ~ 30961069 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027357
TTGAGCTGTACCGTTTTTCGTTGCAATCAATTACATATATCCATAATCTAATCCGTCCTTACATCAGTAACATCACCCATCGTGGCCGTGCTCTTACATCCGAGCAGATACTATGTGCAGCTTTACGTTTCTTTGCTAATGGAAGCTTTCTGTACAATATCGGGGATGCGGAGCATATTAGTAAGGCTACTGTATGCAGAGCTGTACGGAAAGTGTGCCTTGCTCTGAAACGCTTTCTGCACATTTTTGTAGTGTTTCCTGGCCACAAACCCCTGGGAGTCATCAAGGAGGAATTTTACAGAATTGCTGGTTTGTAGCATTCAAGCTGgttcaaatgtatttaatatgatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttagttaataACATTTTGCTGTGACCTCTGaaagttttgtaatatttaaaattacctttaggattccccAATGTGGTTGGATGCATTGACGGCTCACATATACCTATCATTGCACCAACTGAAAATGAGTCAGACTATGTTAACAGGAAGTCAATCCACAGTATTAATGTGCAGGTACGTTGAGTTATGCagtttaaattgtttaaacaaCACACATACTATATCTCAAAACAATACTATATCTCATATCTTATTCTTTCCACTGTGAAGATTATATGTGATGCTGCACATATTATCACTAATGTTGAAGCCAAGTGGCCTGGCTCTGTTCATGACTCACGGATATATCGTGAGTGTACCCTAAGCAACAGACTGCAAAGTGGTAAGTTAATGTATGAACTACACACTTGGGCATTTTAATGCAGCACTAAAccaatgtgtctttttttttttacaggggaGATTGATGGCTTTCTGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027357 True 898 lncRNA 0.36 1 30960172 30961069

Neighbor

gene id symbol gene type direction distance location
XLOC_013494 FO834814.1 coding downstream 104637 30854496 ~ 30855535 (-)
XLOC_013493 NA coding downstream 206749 30752484 ~ 30753423 (-)
XLOC_013492 emc8 coding downstream 455520 30500690 ~ 30504652 (-)
XLOC_013491 gins2 coding downstream 460683 30481030 ~ 30499489 (-)
XLOC_013490 si:ch211-220f16.2 coding downstream 938693 29968205 ~ 30021479 (-)
XLOC_013496 gas8 coding upstream 72053 31033122 ~ 31051847 (-)
XLOC_013497 pdcd5 coding upstream 128888 31089957 ~ 31105391 (-)
XLOC_013498 mc1r coding upstream 265219 31226288 ~ 31227615 (-)
XLOC_013499 CU570893.1 coding upstream 338007 31299076 ~ 31423569 (-)
XLOC_013500 NA coding upstream 763037 31724106 ~ 31724812 (-)
XLOC_013384 BX323829.1 misc downstream 11417941 19542102 ~ 19542231 (-)
XLOC_013487 BX908800.1 non-coding downstream 1041067 29918062 ~ 29919105 (-)
XLOC_013485 NA non-coding downstream 1557156 29397940 ~ 29403016 (-)
XLOC_013484 CT025546.1 non-coding downstream 1652531 29307525 ~ 29307641 (-)
XLOC_013501 NA non-coding upstream 771554 31732623 ~ 31737816 (-)
XLOC_013504 BX908386.2 non-coding upstream 1043989 32005058 ~ 32009056 (-)
XLOC_013505 NA non-coding upstream 1078432 32039501 ~ 32042362 (-)
XLOC_013507 BX649622.1 non-coding upstream 1185639 32146708 ~ 32147630 (-)

Expression


Co-expression Network