XLOC_013500


Basic Information

Item Value
gene id XLOC_013500
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 31724106 ~ 31724812 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026973
TTTTGCGTTTCTGTATAGTTCTGCATAGAATAAGAGCTGCAATGGCCAGTTCACGCGACGGCAGCCCAATAAAGAAACGGAAGTAATAGAATTCAGTGCAACAGCAGTATGGACGTGGAAGACGTGGCACAGAAAAAAATGTGTCTTTGGAAGGCTGGgggttgcacacacacacacacacacaaaaaaaaagcatttttgcttGTTCATCAAAGGTCCTGCAATCACCTTATGCCACTTATTAAACAACATTTGCATCCTGGAAGTACCATGAACCTTGGCAATCTTGGCAATAACCACTTTCCCAGTTTTGCAGAGATTAATTATCTTAAAActaaaaatgtgtttatgttttttataattgACA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026973 True 367 lncRNA 0.39 2 31724106 31724812

Neighbor

gene id symbol gene type direction distance location
XLOC_013499 CU570893.1 coding downstream 300537 31299076 ~ 31423569 (-)
XLOC_013498 mc1r coding downstream 496491 31226288 ~ 31227615 (-)
XLOC_013497 pdcd5 coding downstream 618715 31089957 ~ 31105391 (-)
XLOC_013496 gas8 coding downstream 672259 31033122 ~ 31051847 (-)
XLOC_013495 NA coding downstream 763037 30960172 ~ 30961069 (-)
XLOC_013501 NA coding upstream 7811 31732623 ~ 31737816 (-)
XLOC_013502 olfcs2 coding upstream 187947 31912759 ~ 31916845 (-)
XLOC_013503 olfcs1 coding upstream 240535 31965347 ~ 31969939 (-)
XLOC_013504 BX908386.2 coding upstream 280246 32005058 ~ 32009056 (-)
XLOC_013505 NA coding upstream 314689 32039501 ~ 32042362 (-)
XLOC_013384 BX323829.1 misc downstream 12181875 19542102 ~ 19542231 (-)
XLOC_013494 FO834814.1 non-coding downstream 868571 30854496 ~ 30855535 (-)
XLOC_013493 NA non-coding downstream 970683 30752484 ~ 30753423 (-)
XLOC_013487 BX908800.1 non-coding downstream 1805001 29918062 ~ 29919105 (-)
XLOC_013485 NA non-coding downstream 2321090 29397940 ~ 29403016 (-)
XLOC_013507 BX649622.1 non-coding upstream 421896 32146708 ~ 32147630 (-)
XLOC_013508 NA non-coding upstream 583664 32308476 ~ 32309563 (-)

Expression


Co-expression Network