G483129


Basic Information

Item Value
gene id G483129
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 3824589 ~ 3827254 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU554372
CTGCTGAGAGCCACTCCAGCGAGACTTTACCGTGGCCAGCCCAAAGTCACCAATCTTTACCGTCCAGCCTTCGTGCAGGAAGATATCTGACACATGAGCTCAGGTGTATCATGCAGAACACAGAATGCAACACATAGTTATTAGGGCAACATCACTAGGGAGAATGCATCAGCATTATTATTCCAATAAATCATCAACCTTAGCCTGTAGTGTTGTCACGGTACCAAAATTCCAGTAGTCGGTACCAATACCATAAAAATTTTACGGTTCTCGGTACCAATTTCGGTACCACAGCAAAATCTGTTGTAACTATTTTACTATTTTATATAGCCTATTTTAAAAGCATATTAAATATGGTAATCATACATAGAAATATTTGGAGCGTGTGTGTGTATGTTTGTGTGTGTGTTTATACCTCAATGAAATAAATTTTGAAATACATACACATTATTGTATATATACATAAACATACATACATATATATATATATAAAAAACGCTCAAACATCCATTTTGTAACAGACGTGCGTGTTTATTTTAGCTATTCCTTCAATGAAACGACACACTACAGCCTGTAAAACTATGAAATAAATATCGGTAAATAATGGTAACCTAAATAATAAGAAAGTTAAATATTATTAAAAAAAAAAATAAATAAATAAAATAAAATAAAAACATTCGTTTTTTATTTCTACACTAAGATGCGTCATATAGCCTACTGCTCTGCGCTTTGAGAGGGATGTGGGACACGTGCAGGAAAGAGACCATTTCTCTTTAATAATATCTTCATTTTATCTCTTGATGTTACAAGTAACTGACACTTGTTGTGAAAGGTCTGAAGAGCGAGTTCTATCGTCACACATTCAGGCTATATTTGATTTAGCGCTGCCAGGGAAAGCGAAAGTAAAAATCACCAGCGTGTGTGAAACGCGCTACACAAATATACTTATTAAGTCTAATAACAAGCACAAACTGTGTTAAATAGAAACTGACGTGCAAGCAAAAAGGTTTCTGTTTTTTCTACTTTACCACAGTAAAGAATGCGAATAGCCTATAATAGGCCTAAAAGCGAACGAAAGGAAGAAACGTTACAATCCCCTTTGTGAGTGAAGATTTGGGAAAAAAAACAGAGATTCCATGTTCAGTGGAATAACTAATGGAATATTTTTAAATTCTCTGCTTATCGGGTGATAATACAAAGCTTAAATGTATGGACTCACGTACCTCTCTCATTCGGCATGAACCAAAATGTTTCCATGGCTGCGATGTCACATTTAATTGCTAATCTATTATTTCTTTTGTAAACAAAGCTTTGTGCTTCACTCGTGTCATATTCAAGTAAATACAGTAAATACTGGCACAGCCCTATCATGGGTACCGAATATACCCGGATTCTCGGTACTACAGAAATGCTGGTATCGTCACATTTTAAAAATTTCAGTACCGACTTGGTACCGAAGTACCGGTACTTTTGACAACACTATTAGCCTGCATAGAGCTGTTCTGAGAAATATGGAAGTATTTCTGGCTAACGTTGCATCATCAAGTACCCACAAGCCCTATATTAATTTAAGCAGAAATATGTATTAAAACATCTATTAGTAGATATGGGGATATAAAGTAAAACAGTGGAGAATAAAGCAACATCTTATGCCTAAAATAATTTTGGTAAATGAGACAGTTCTTTATTTACAAGTATTTCATCATGACTAACAATGGCTTGACAATCCAAGTGTGGGTATCTGCAGGTTGGAGCAATGGGCGCAACAAAAGGTTGGGGCATGCCAAAAGGTAGGGGCATAGAGAAAAGTCTTTTTCATTGGTTGCAAAAACTATCTGTCAGGGTGTGGGGTAGGGTTAGGGCTTAATTTCTGTTGTAGCAATTCATCTTCCGGCACGCCCATTACTCCGAGCTGCAGCTAACCCGTCTTGTGTCTGGGGTCTCTGCGGAACAAAAGTGGGCTTTTCTGAATTTGTGGGTGTTTTCAAACTGGTGGGTGTTTATAAATCACGCAATGAAAATGACATTCTTTACCCGACTCCACCCCTAAACCCTACCCTCACTGTGACGTAGGCAAATCAGGTAACACTCTCAAAAATGCCCCTCTGTTTATGGCCTCGCCCACTGATCTGGTAACTCTTATTACTGTCCTGCAGAGACCTATACTTGCCTGTCTCTGGCAATCTACTAGGACATGACAAGATGCAACAATGATGCCATCTACTGGCAGAAAATAGGTTGAATCTGATCTATCCTGCAACAGATCTCTCTCACAATACAGGCAAGAACACTGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU554372 True 2297 lncRNA 0.38 2 3824589 3827254

Neighbor

gene id symbol gene type direction distance location
CI01000339_03806022_03809529 NA coding downstream 14917 3805764 ~ 3809672 (-)
CI01000339_03783856_03786637 NA coding downstream 37835 3782896 ~ 3786754 (-)
CI01000339_03763339_03767443 RNF181 coding downstream 56436 3763004 ~ 3768153 (-)
CI01000339_03514853_03630108 ARVCFB, ARVCF coding downstream 194481 3514853 ~ 3630108 (-)
CI01000339_03478894_03491264 ERAP1B coding downstream 333325 3478885 ~ 3491264 (-)
CI01000339_03832789_03834539 NA coding upstream 4778 3832032 ~ 3834539 (-)
CI01000339_03848230_03850745 LMAN2LB coding upstream 20943 3848197 ~ 3851487 (-)
CI01000339_03872310_03888527 HTRA4 coding upstream 44458 3871712 ~ 3888527 (-)
CI01000339_04128125_04129743 DRD7 coding upstream 300578 4127832 ~ 4129743 (-)
CI01000339_04303248_04303541 NA coding upstream 475689 4302943 ~ 4304154 (-)
G483143 NA non-coding downstream 802 3822307 ~ 3823787 (-)
G483202 NA non-coding downstream 42733 3781629 ~ 3781856 (-)
G483201 NA non-coding downstream 44918 3779450 ~ 3779671 (-)
G483200 NA non-coding downstream 45253 3779125 ~ 3779336 (-)
G483198 NA non-coding downstream 47103 3777230 ~ 3777486 (-)
G483153 NA non-coding upstream 1430 3828684 ~ 3878354 (-)
G483207 NA non-coding upstream 8299 3835553 ~ 3911333 (-)
G483220 NA non-coding upstream 38385 3865639 ~ 3866540 (-)
G483261 NA non-coding upstream 183304 4010558 ~ 4037346 (-)
G483268 NA non-coding upstream 281669 4108923 ~ 4112066 (-)
G483199 NA other downstream 46038 3777891 ~ 3778551 (-)
G483104 NA other downstream 411598 3394108 ~ 3401228 (-)
CI01000339_01988812_02024891 NA other downstream 1827144 1988537 ~ 2025183 (-)
G481662 NA other downstream 2091570 1723770 ~ 1733019 (-)
G481610 NA other downstream 2250627 1571537 ~ 1573962 (-)
G483285 NA other upstream 298004 4125258 ~ 4170502 (-)
G483509 NA other upstream 785598 4612852 ~ 4613318 (-)
G483512 NA other upstream 790858 4618112 ~ 4618725 (-)
G483481 NA other upstream 1024503 4851757 ~ 4853447 (-)
G484394 NA other upstream 1429313 5274086 ~ 5274270 (-)

Expression


Co-expression Network