Gene
RNA
| Item | Value |
|---|---|
| gene id | G483268 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 4108923 ~ 4112066 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU554517 | True | 2088 | lncRNA | 0.36 | 3 | 4108923 | 4112066 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_03872310_03888527 | HTRA4 | coding | downstream | 220396 | 3871712 ~ 3888527 (-) |
| CI01000339_03848230_03850745 | LMAN2LB | coding | downstream | 257436 | 3848197 ~ 3851487 (-) |
| CI01000339_03832789_03834539 | NA | coding | downstream | 274384 | 3832032 ~ 3834539 (-) |
| CI01000339_03806022_03809529 | NA | coding | downstream | 299251 | 3805764 ~ 3809672 (-) |
| CI01000339_03783856_03786637 | NA | coding | downstream | 322169 | 3782896 ~ 3786754 (-) |
| CI01000339_04128125_04129743 | DRD7 | coding | upstream | 15766 | 4127832 ~ 4129743 (-) |
| CI01000339_04303248_04303541 | NA | coding | upstream | 190877 | 4302943 ~ 4304154 (-) |
| CI01000339_04347010_04347312 | CLG1H8ORF4, C21H8ORF4, CLG13H8ORF4 | coding | upstream | 233887 | 4345953 ~ 4347394 (-) |
| CI01000339_04388819_04415624 | PPP3CCA, PPP3CCB, PPP3CC, PP2BC | coding | upstream | 276326 | 4388392 ~ 4415624 (-) |
| CI01000339_04428882_04435809 | NA | coding | upstream | 316722 | 4428788 ~ 4435809 (-) |
| G483261 | NA | non-coding | downstream | 71577 | 4010558 ~ 4037346 (-) |
| G483207 | NA | non-coding | downstream | 197590 | 3835553 ~ 3911333 (-) |
| G483153 | NA | non-coding | downstream | 230569 | 3828684 ~ 3878354 (-) |
| G483220 | NA | non-coding | downstream | 242383 | 3865639 ~ 3866540 (-) |
| G483129 | NA | non-coding | downstream | 281669 | 3824589 ~ 3827254 (-) |
| G483289 | NA | non-coding | upstream | 10457 | 4122523 ~ 4122918 (-) |
| G483324 | NA | non-coding | upstream | 18852 | 4130918 ~ 4146936 (-) |
| G483355 | NA | non-coding | upstream | 81887 | 4193953 ~ 4194472 (-) |
| G483356 | NA | non-coding | upstream | 85666 | 4197732 ~ 4198079 (-) |
| G483357 | NA | non-coding | upstream | 86351 | 4198417 ~ 4198747 (-) |
| G483199 | NA | other | downstream | 330372 | 3777891 ~ 3778551 (-) |
| G483104 | NA | other | downstream | 695932 | 3394108 ~ 3401228 (-) |
| CI01000339_01988812_02024891 | NA | other | downstream | 2111478 | 1988537 ~ 2025183 (-) |
| G481662 | NA | other | downstream | 2375904 | 1723770 ~ 1733019 (-) |
| G481610 | NA | other | downstream | 2534961 | 1571537 ~ 1573962 (-) |
| G483285 | NA | other | upstream | 13192 | 4125258 ~ 4170502 (-) |
| G483509 | NA | other | upstream | 500786 | 4612852 ~ 4613318 (-) |
| G483512 | NA | other | upstream | 506046 | 4618112 ~ 4618725 (-) |
| G483481 | NA | other | upstream | 739691 | 4851757 ~ 4853447 (-) |
| G484394 | NA | other | upstream | 1144501 | 5274086 ~ 5274270 (-) |
