XLOC_013518 (olfcx3)


Basic Information

Item Value
gene id XLOC_013518
gene name olfcx3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 33248996 ~ 33254039 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026634
CCATACTAGACTTTTTCtgtctttattatattttacaggaaatccAAAATGTTTTCACATATGCGATTTGAATTGCACATTGTCTCAAGGATCAGAGTGTATTGGATGTGTAAAATCATTGGTTCAAGCAAGTAATTACATTCCCAAGCTTGGTACATAACAGACTTACACCAGGAGGGGCATACAGTACGCTTGATTAATTTAAGGACATCCTTCAATCACAGATTATCAATATAGGCTGTACCTGTTAGATTTGTTAGATTCGTTTCTGTGTCAGTTATGGCAGGAGTTTATAAAGTGTTGATTTCATTTTGGCCACTGCTGTGTATCGGTGTGCAGAGCCAATATAAAAGCAAGGAAAACTGTGTCTTTCAGGGAGATGAAGACACATACAGCTTTTACCAGCGGGGAGATGTGGTTTTGGGAGGAATCTTTCCTTTGCATTCTAGCCCTGTATCATCGCTGTTTTCTTTCAGAACCAAACCTAAGCCAACAAGTTACAAATTTTTTACCCCTCGAGCCTTGAGGTGGATGCAGACAATGATCTTTGCTGTGAGAGAAATAAACCAGCGGCAAGATCTTTTACCCAATCTGTCTCTGGGCTACCACATCAGGGACAGCGGTGATGATATACCAGTGTCTGTGAAGAGGTCTCTTCTCCTGGTCAATGGACAGCCAGAAAAGGGCAGTGGACAGAGCTGTGAAGACATACAAATGCAGCCGAGTCCTGTGATAGTAGGTGATGCTGCATCAGGAGTCTCCATGACTGTTCTGAGAACTTTAGGCTCCTTCAAAATACCATTGgtGAGCTATTTTGCATCCTGCTCTTGTCTCAGTAACAAAAGGGAGTTTCCAGCATTCATGCGGACCATGCCAAGTGACCTATTTCAGATTAAGGCTTTGGTAAaacttattaattattttcaatggACATGGGTTGGACTGATAGGTGTGAATTCTGACTATGCTCACTTTGCTATCCAGCTCTTCCTTAAAGAATCAGAACAATTTAATATTTGTCCTGCTTATGTTCACTTTTATCCTGTTGTACTGATGGAAGATGCATTGGAGGAACTTGTGAACATTTTAAAAGCCTCTTCTGCCACAGTCATAATAAATTTTTCTGGAGAATCAGAACTGCATAGTATTCTAAAAGAATGCAGACGTCAAAATGTCACACATCTGCAGTGGATCGCCAGTGAGGCTTGGGCCACATCAAAATCCCTCTGGGAGGAATTTGGTGATCTGCTAAAGGGTACATTGGGTTTTGCCATACATAGAGCTGATATTCCACATCTTGGCAGTTATCTTAAAGAAATAAGACCTCAGACCTCCCATTTCCTCTCTGAGTTTTGGGAAGAGACTTTTCGTTGTCGACTGAATGGTTCCTTAAACACTCATGCACATGGAGAACAGGCACAAAACTGGCCAGCCTGTAATGGTAGTGAAAATCTGGATAATGTGTACACCACTTATTCAGACGTGTCACAACTCAGAGTCTCCTACAATGTTTACAAAGCTGTGTATCTCATAGCACATGCACTGCATGACATGAGCACATGTGTTCCAGGAAAGGGCCCGTTCCAGAATGGGACATGTGGGAGTCTGTATCAAATTCAGCCATGGCAGCTCCTGTACTACATGAAACAAGCAAATTTTACAATCTTAGGAGAAGAGGTCAGATTTGATGAGAATGGTGATCCTATTGCATCTTATGACCTTATGAACTGGCAAAGAGGATCCGATAGCTCCCTTCAACTTGTCAGGGTGGGATTCTATGATGCTTCCCTTGAAGATGACAAGGACCTAGTGGTAGAGGAGTCAGTAATTATGTGGCACAGAGCAGAGAAGGCACCAAAATCAATGTGTAGTCAAAGTTGTCTGCCGGGCACCAGAAAGGCCAGGCAAAAAGGAAAGCCAGTCTGCTGCTTTGACTGTATATCATGTGCTGAAGGAGAGATCAGTAATCAGACAGacTCAATTGATTGCTTGACATGCTCAAAAGAAACGTGGCCTAACCAAGCCCAAGACCGGTGCATCCCCAAAACTTTAGAGTTTTTGTCCTTTCAGGAGCCCTTGGGAATAATTCTTTGGGTATTTTCAGCATTCGGGGCCTGTGCAGCATTAGCAGTGCTCTGTGTGTTTGTAATGTATAGGAAGACTCCAGTTGTACGTGGAAACAATATAGAGTTAAGTTTCCTTCTCCTCTTGTTCCTCTGTGCTTGTTTTTTGATTGGCCTAACATTTTTAGGGAAGCCAACTGATTGGCTATGCCAAATTCGCTATCCAGCTTTTGGAATCAGCTTTACACTCTGTATTTCATGCATCTTGGCAAAAACTGTGGTCGTTTTAATGGCTTTCAGGGCCACCATCCCTGGCAATAATGTCATGAAGTGGTTTGGTCCTGTTAAACAAAGATCAAGTGTTATCCTGTGCACATGTGTGCAAGCACTTATTTGCATAATATGGTTAACAACTAAGCCCCCTCTTGCTTCATATAACAGCAAGTTCATGAGTGAAACTATAATTGTTGAATGTTCTGTGGGATCTGAAATTGGATTTTGGTGTGTGCTGGGATACGTTGGCCTTCTTGCTTGCTTGTGTTTTTTAATGGCATTTTTGGCTAGAAAGTTACCAGACAACTTTAATGAGGCTAAATTCATCACATTCAGCATGCTCATATTTTTTGCTGTGTGGGTAACCTTCATTCCAGTCTACGTGAGCTCAAGTGGAAAGTATATGGTTGCCGTCCATGTCTTTGCTATTCTAGCTTCTGCCTTTGGTCTTTTAATGTGTATATTTGCTCCTAAATGTTATGTTGTATTACTGAAACCAGAGAGAAATGACAAAAAACACATgatgaaaaaataacaacaacaacaacaacaacatctaataATGTAGTAATAGCCCTTTACCTTTCCCCCACATTGTTCGctatttaatttttagtttaataaaaatgcaatGCAAAATACATTGTCTAATTTTAGTTTATGAGATGGCGTAACTCATTTCCTTtaacttttaaatgtaaactattttttttttttttatagttgcaTATTTAgtctgttttaatgtttattatatttttgtttgatttatacaTTTTGTAAAACACCTTGATGTGCGCTATACAAATCATATCTTGCCTTAACACCGTTGGGTTTTCTCTAGAGTTTTTAACTGTGCTCAGTTGAAATATGCCTCACCTCGTCAGAAATTCAAACAAGAAGAGGTATACTTCAGCAATAGCAGGAATATTATCTGCTTTTGTCACATATTAAATGGATGCATCTAAAACAATATAAACAGCTTAAACTGCAGATGAGCACCAATTAAACAGGAAAATGCTAGTCAAATCCTTAAATTCATAAAGTTTGTAGTGTATAAAGGTTGATTGTGTTTAAATTATATGGATTATACTGAATGTATCTATTTTCATGAGTAACGTCTATAAATTCAAAGTCATTATCTACTgtgtaaatcacacacacacatgaaaatttaaaaaagatattCAAAAGACTGATTGGTcctatatatttgtgtttttcccaTCCCTCTTACTGAAGGCACACCTACAGTACACGTTCAACCTTttcctaaccaaacacacctgaatcagctcatcagaacattagaacaactgagaggggtctggatgcagacctggtgcagtgcaatctgagctgcctccaatgctttttaatgcgctcaccttaccccacccctaaccctacctgtcacagtgacgtcacttattccattgagtgcattgtgtctgagattgcattgctgagtgatgcaatctcaacttgcatcataaaggctgcatccagatactattggaaagaACTTGACCTGAAATCAATGGGTCAGATGAGGGAGACATCTAAAATATGTTCTGCTGGTGTGCCTCCAGGGAAATGGTTGGTAAACACTATGTATTTATTCTTACAGTTTACTCTAATTCTAACTTCTCATGCATGTTTCATGAGTTACAATACaatatacaaaattaaattacatgtttGAAAATTAAAACATGTTACTTGTTGGGAATTTGCTTAATCTGACAAGGCATGTTAAGAAAACGATAATATGAAACTCAGTGGGCAAATTCTGGAGTCGTATTGCATAACACactatatattattttaagaaatattattttactcaATAAAACTTTT
>TCONS_00026635
gtGAGCTATTTTGCATCCTGCTCTTGTCTCAGTAACAAAAGGGAGTTTCCAGCATTCATGCGGACCATGCCAAGTGACCTATTTCAGATTAAGGCTTTGGTAAaacttattaattattttcaatggACATGGGTTGGACTGATAGGTGTGAATTCTGACTATGCTCACTTTGCTATCCAGCTCTTCCTTAAAGAATCAGAACAATTTAATATTTGTCCTGCTTATGTTCACTTTTATCCTGTTGTACTGATGGAAGATGCATTGGAGGAACTTGTGAACATTTTAAAAGCCTCTTCTGCCACAGTCATAATAAATTTTTCTGGAGAATCAGAACTGCATAGTATTCTAAAAGAATGCAGACGTCAAAATGTCACACATCTGCAGTGGATCGCCAGTGAGGCTTGGGCCACATCAAAATCCCTCTGGGAGGAATTTGGTGATCTGCTAAAGGGTACATTGGGTTTTGCCATACATAGAGCTGATATTCCACATCTTGGCAGTTATCTTAAAGAAATAAGACCTCAGACCTCCCATTTCCTCTCTGAGTTTTGGGAAGAGACTTTTCGTTGTCGACTGAATGGTTCCTTAAACACTCATGCACATGGAGAACAGGCACAAAACTGGCCAGCCTGTAATGGTAGTGAAAATCTGGATAATGTGTACACCACTTATTCAGACGTGTCACAACTCAGAGTCTCCTACAATGTTTACAAAGCTGTGTATCTCATAGCACATGCACTGCATGACATGAGCACATGTGTTCCAGGAAAGGGCCCGTTCCAGAATGGGACATGTGGGAGTCTGTATCAAATTCAGCCATGGCAGCTCCTGTACTACATGAAACAAGCAAATTTTACAATCTTAGGAGAAGAGGTCAGATTTGATGAGAATGGTGATCCTATTGCATCTTATGACCTTATGAACTGGCAAAGAGGATCCGATAGCTCCCTTCAACTTGTCAGGGTGGGATTCTATGATGCTTCCCTTGAAGATGACAAGGACCTAGTGGTAGAGGAGTCAGTAATTATGTGGCACAGAGCAGAGAAGGCACCAAAATCAATGTGTAGTCAAAGTTGTCTGCCGGGCACCAGAAAGGCCAGGCAAAAAGGAAAGCCAGTCTGCTGCTTTGACTGTATATCATGTGCTGAAGGAGAGATCAGTAATCAGACAGacTCAATTGATTGCTTGACATGCTCAAAAGAAACGTGGCCTAACCAAGCCCAAGACCGGTGCATCCCCAAAACTTTAGAGTTTTTGTCCTTTCAGGAGCCCTTGGGAATAATTCTTTGGGTATTTTCAGCATTCGGGGCCTGTGCAGCATTAGCAGTGCTCTGTGTGTTTGTAATGTATAGGAAGACTCCAGTTGTACGTGGAAACAATATAGAGTTAAGTTTCCTTCTCCTCTTGTTCCTCTGTGCTTGTTTTTTGATTGGCCTAACATTTTTAGGGAAGCCAACTGATTGGCTATGCCAAATTCGCTATCCAGCTTTTGGAATCAGCTTTACACTCTGTATTTCATGCATCTTGGCAAAAACTGTGGTCGTTTTAATGGCTTTCAGGGCCACCATCCCTGGCAATAATGTCATGAAGTGGTTTGGTCCTGTTAAACAAAGATCAAGTGTTATCCTGTGCACATGTGTGCAAGCACTTATTTGCATAATATGGTTAACAACTAAGCCCCCTCTTGCTTCATATAACAGCAAGTTCATGAGTGAAACTATAATTGTTGAATGTTCTGTGGGATCTGAAATTGGATTTTGGTGTGTGCTGGGATACGTTGGCCTTCTTGCTTGCTTGTGTTTTTTAATGGCATTTTTGGCTAGAAAGTTACCAGACAACTTTAATGAGGCTAAATTCATCACATTCAGCATGCTCATATTTTTTGCTGTGTGGGTAACCTTCATTCCAGTCTACGTGAGCTCAAGTGGAAAGTATATGGTTGCCGTCCATGTCTTTGCTATTCTAGCTTCTGCCTTTGGTCTTTTAATGTGTATATTTGCTCCTAAATGTTATGTTGTATTACTGAAACCAGAGAGAAATGACAAAAAACACATgatgaaaaaa

Function

symbol description
olfcx3 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0038023 signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-129 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000056154

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026634 False 4196 mRNA 0.39 6 33248996 33254039
TCONS_00026635 True 2064 mRNA 0.41 4 33250324 33252983

Neighbor

gene id symbol gene type direction distance location
XLOC_013517 olfcd3 coding downstream 155255 33090443 ~ 33093741 (-)
XLOC_013516 CABZ01032906.2 coding downstream 163990 33080843 ~ 33085006 (-)
XLOC_013515 CABZ01032906.1 coding downstream 168542 33074718 ~ 33080454 (-)
XLOC_013514 NA coding downstream 201552 33042762 ~ 33047444 (-)
XLOC_013513 NA coding downstream 209139 33037834 ~ 33039857 (-)
XLOC_013519 olfcu1 coding upstream 79372 33333411 ~ 33337703 (-)
XLOC_013520 CU463109.1 coding upstream 460318 33714357 ~ 33735250 (-)
XLOC_013521 NA coding upstream 528425 33782464 ~ 33796612 (-)
XLOC_013522 NA coding upstream 692303 33946342 ~ 33949859 (-)
XLOC_013523 olfcr1 coding upstream 716346 33970385 ~ 33979693 (-)
XLOC_013384 BX323829.1 misc downstream 13706765 19542102 ~ 19542231 (-)
XLOC_013512 NA non-coding downstream 348998 32896565 ~ 32899998 (-)
XLOC_013511 NA non-coding downstream 433642 32782613 ~ 32815354 (-)
XLOC_013509 BX908401.2 non-coding downstream 721892 32525411 ~ 32527104 (-)
XLOC_013527 NA non-coding upstream 973313 34227352 ~ 34227899 (-)
XLOC_013529 NA non-coding upstream 1297489 34551528 ~ 34554617 (-)

Expression


Co-expression Network