XLOC_013519 (olfcu1)


Basic Information

Item Value
gene id XLOC_013519
gene name olfcu1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 33333411 ~ 33337703 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026636
ATGCCAGTGATTGAACTGGTGTCACTGGGCCTTGCTCTTCTGTTGAACTTCTCAGTAGTTTTATGCACCTCATTGGACAAAAGTTGCTGGACATTGGGTGATTTTAATTCCCCAGTACTGGAACAGGATGGTGATATTGTAATTGGAGGGCTGTTTCCCATGCACAATATAGCTCCAGAAACTGACTATAATTTCTCTGATTTGCCACACTATCAAGATTGTAGCAGGTTTGACTTTCGTGCATTTCGCTGGGTTCAAACAATGGTCTTTGCCATTGAAGAAATCAACAGCAACTCAAGTTTGTTACCTGGAGTGGCACTAGGTTATAGGATCTTGGATAGCTGTGATCATGTGCACACCAGTCTGCGCAGTGCACTTTTTCTTCTGAACGGCACATTTGGTCAAACACAGACTGATGCTGTTGGCACTGCAAATTGCCTGTCCACAGCCCCAGTGCCAGCTGTCATAGGCCTGGCATCATCTTCACCTACACGAGCTGTGGCACAAACTTTGGGTCCGTTTGGAATTCCATTGATAAGTTACTTTGCCACATGCACTTGCCTCACAGATAAAAAGGAGTATCCTTCTTTCCTTCGCACTGTCCCTAGTGACAGGTTTCAGGTGCAGGGACTGGTCCAGTTGGTTTCCCACTTTGGTTGGCGCTGGGTGGGTACAGTGGGCACGGATGATGACTACAGTCACTATGGTATCCAGGCATTTACCGAGCAGCTTGAAAGACTTGGTAGCTGTATTGCCTTTCATCAAACTATACCCAAATCACCTTCTCAGGCACAGATACGTTCTATTCTTAATAGTCTTGAAAGTTCTACAGCACAAGTAATTATAGCATTTGCCACTGAAGGAGAACTGCTGGAGCTCCTGGTTGAAGTTGCTCGCCGGAATCTGACTAGGTTGCAATGGGTGGCCAGTGAGGCCTGGGTGACAGCCAAACTTCTCACAATCCCCGAGCTTCATCCTGTCCTGATAGGAACAGTGGGCTTTTCTTTCAGGGGCACCGCTATTCCTGGCTTGGCTGAGTTTCTCTTCAGGGTAAGGCCTTCATCGAGACCTGAATCTGCTTTCACTAACATGTTTTGGGAGGAACTGTTTGGATGCAGACTAGGTTACGAGGACAGCAATGATTCTGTGTTGCCACTCTGTACTGGCTCAGAGAATCTGCTGGAGACGGAAAGTAGCTACACTGATGTATCAAGGGTGAGGATTTCATACAATGTCTATAAGGCTGTCTATGCTATAGCTCATGCTCTACACCAGCTATTACAATGTGGCTCTAAGGAACAAGGCTCAGATCACAGCTGTAATACTGAATCAAAGTTCTCTCCATTGCAGcttctaCGCTATCTGAAGAAGGTACACTTTACAAACCAGTTCAATGAAAAAGTCTATTTTGACACCAATGGAGAGCCTGTGCCACTCTATGACATCATAAACTGGCAGAAAAATGCTAGAGGTACCATCAATTTTCAGTTGGTTGGCACCTATGACGGCTCCGCCCCACATGGGCAGCAGCTTAAAATAGAAGAGGGCTTAATTCGGTGGACAGGCGGACAAACCAAGGTTCCAGTTTCCTTATGCAGTCCTCCTTGCCCACCTGGAACCCGCCAGGCCACTCGACCAGGACAGCCTGTCTGCTGCTTTGACTGTTTGCCTTGTGCTGAAGGAGAAATCAGCAATATATCAGGTGCTACTGAGTGTCTCAAGTGTCCAGAGTACTACTGGCCAAACAAAGAAAGAGTTTCCTGTGTTGCTGGCATTGAGGAGTTTCTGTCATACCATGACGTGATGGGGATCATTCTCATTTCTTTGTCTCTATTTGGTGTTGCTGTGGCAACAGTTGTtatggtgattttttttattttccgaAGCACACCCATAGTTAAGGCCAACAACTCTGAGATGAGTTTTCTACTGCTGCTGTCTCTCAAACTTTGCTTCCTTTGCTCACTGGTGTTCGTGGGTCGACCCTCGCCATTGACATGCCGCGCCCGACAAGCAGCATTTGGAATCAGCTTTGTTCTATGTATCTCATGCATACTGGTCAAGACCATAGTGGTGCTTTTGGCCTTTCGTTCTACAGTTCCTGGATCCATTTCTCTAAAGGTGTTTGGCCCCCCACAGCAAAGGGTTTTCATTTTCTGCTGCACAACAGGACAAGTTATTCTGTGCGCTTGTTGGTTGGCACTAGCACCTCCTTACCCCTATAAAAACACATCCTATCAGGATGGCAGGATTATACTAGAATGCAAAGACATTTTGCCACTTGGGTTTTACCTGGTTCTGGGCTATATAGGATTGCTCTCTTGTATGTGCTTTGTCCTCGCTTTCCTTGGAAGGAAACTTCCAGATACATTTAATGAAGCTAAGCTTATCACATTTAGTATGCTCATATTTTGTGCAGTGTGGATCTCTTTTATACCAGCATACAACAGTTCTCCAGGGAAATACACAGTTGCTGTTGAGATATTTGCCATTCTAGCTTCTACTTTTGgacttttatttagcatttttataccTAAATGTTATGTAATTCTGTTAAGGCCTGATTTAAACACCAAAAAGGGAATGACTGGAAAATTGTCgaaatga

Function

symbol description
olfcu1 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in olfactory epithelium.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0038023 signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-175 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in olfactory epithelium.

Ensembl:

ensembl_id ENSDARG00000040632

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026636 True 2607 mRNA 0.45 6 33333411 33337703

Neighbor

gene id symbol gene type direction distance location
XLOC_013518 olfcx3 coding downstream 79372 33248996 ~ 33254039 (-)
XLOC_013517 olfcd3 coding downstream 239670 33090443 ~ 33093741 (-)
XLOC_013516 CABZ01032906.2 coding downstream 248405 33080843 ~ 33085006 (-)
XLOC_013515 CABZ01032906.1 coding downstream 252957 33074718 ~ 33080454 (-)
XLOC_013514 NA coding downstream 285967 33042762 ~ 33047444 (-)
XLOC_013520 CU463109.1 coding upstream 376654 33714357 ~ 33735250 (-)
XLOC_013521 NA coding upstream 444761 33782464 ~ 33796612 (-)
XLOC_013522 NA coding upstream 608639 33946342 ~ 33949859 (-)
XLOC_013523 olfcr1 coding upstream 632682 33970385 ~ 33979693 (-)
XLOC_013524 plch1 coding upstream 643771 33981474 ~ 34143189 (-)
XLOC_013384 BX323829.1 misc downstream 13791180 19542102 ~ 19542231 (-)
XLOC_013513 NA non-coding downstream 293554 33037834 ~ 33039857 (-)
XLOC_013512 NA non-coding downstream 433413 32896565 ~ 32899998 (-)
XLOC_013511 NA non-coding downstream 518057 32782613 ~ 32815354 (-)
XLOC_013509 BX908401.2 non-coding downstream 806307 32525411 ~ 32527104 (-)
XLOC_013527 NA non-coding upstream 889649 34227352 ~ 34227899 (-)
XLOC_013529 NA non-coding upstream 1213825 34551528 ~ 34554617 (-)

Expression


Co-expression Network