XLOC_013521


Basic Information

Item Value
gene id XLOC_013521
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 33782464 ~ 33796612 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027367
ATGCATTCAGTTTTATTGAACatcaattatataaaaacaagtgACATTCTGTAacaattaagaaaacaaaaaatcatATAAACAAATACACCGTAAGCTCTTTTTAACACTTCTGCATAGTGTTTCACTCTGACTCCTCAGTTCTTTCCTCAATGAAAAACTATGAATGAGGAAAAGTGCAATAATGCACTTCCAGTTAAGCTGAAAATAGCCAATCATCAGTCTTATTAGCCATTCTGTTATGTAGGGGAAGGGGATCTGTGCAGATTTTCTTGACAGGATAAGTTATGTCATTTGGAAAatactttgtgtttgtgtgtattttgacagAAATATAACTTGGAATTCCCCAGTGTGTGTATTACTGAATCTTCATCTGTGTTCTGCTGTATTGTGTTCTTGATGAAGGCTTGAGATAGAAGGTTCTGTGTGAGTCTAGTCCAGTTAATTTAATCTTtctgatgtgtatatatatatatattttttttttttttttcaatattttgcctttaaatcaggggtgcccaaacttggtcctggagggccggtgtcctgaagagtttagctccaacgccaattagacacacctgaccCAGTTAATCTAGCTCTTCTTGGTCATGCTAGAAGTTTCCAGGTAGGTCTCTGGGTTTGGGGAGCCCTGCTCTTAATAAATAGAGAATAGGATTTTTGTGTGTCCTTTTTGTTACCTATCCCCTCCCCAAATATGCACTTTTAAAATAGAGTTTGTAACAGTAAACTCACTAGGAattgtggccaatcaaacacAGTCTGGGGTGTGCATATTAATAATCCTGTGTGCAACATAGCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027367 True 830 lncRNA 0.37 2 33782464 33796612

Neighbor

gene id symbol gene type direction distance location
XLOC_013520 CU463109.1 coding downstream 47214 33714357 ~ 33735250 (-)
XLOC_013519 olfcu1 coding downstream 444761 33333411 ~ 33337703 (-)
XLOC_013518 olfcx3 coding downstream 528425 33248996 ~ 33254039 (-)
XLOC_013517 olfcd3 coding downstream 688723 33090443 ~ 33093741 (-)
XLOC_013516 CABZ01032906.2 coding downstream 697458 33080843 ~ 33085006 (-)
XLOC_013522 NA coding upstream 149730 33946342 ~ 33949859 (-)
XLOC_013523 olfcr1 coding upstream 173773 33970385 ~ 33979693 (-)
XLOC_013524 plch1 coding upstream 184862 33981474 ~ 34143189 (-)
XLOC_013525 C18H3orf33 coding upstream 349395 34146007 ~ 34156792 (-)
XLOC_013526 slc33a1 coding upstream 361566 34158178 ~ 34171280 (-)
XLOC_013384 BX323829.1 misc downstream 14240233 19542102 ~ 19542231 (-)
XLOC_013514 NA non-coding downstream 735020 33042762 ~ 33047444 (-)
XLOC_013513 NA non-coding downstream 742607 33037834 ~ 33039857 (-)
XLOC_013512 NA non-coding downstream 882466 32896565 ~ 32899998 (-)
XLOC_013511 NA non-coding downstream 967110 32782613 ~ 32815354 (-)
XLOC_013527 NA non-coding upstream 430740 34227352 ~ 34227899 (-)
XLOC_013529 NA non-coding upstream 754916 34551528 ~ 34554617 (-)
XLOC_013530 NA non-coding upstream 1089628 34886240 ~ 34888072 (-)
XLOC_013531 NA non-coding upstream 1454686 35251298 ~ 35254022 (-)

Expression


Co-expression Network