G483493


Basic Information

Item Value
gene id G483493
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 4827554 ~ 4834064 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU554781
AAGAATCAGTCAATTTGTTTCTATATTGCTGTATAAATAAACATTTTTGGTTACAATTTGGTTATATATAGGTTATATATTGGCCCACAACATTCTTTCAAAAATCTTCTGTGTTCAACTGCAGAAAGTAAGTCATACAGGTTTGGAATGACATGAGGGTGAGTACATGACAGAATTTTAATTTTTAGGTGAATGATCCCTTTAATGTGAGTGTAAAGCTCTCTTGCATCACAGAGGCAGGGCTCTGAGGGGTAGCATAGCAGGTTTATGGCTCACAGTGGGGAAAGTTTGAGTGGTCTTTTGGGGAAGGTGACTGGACGGAATAGATCTACCTGCTGAGAGAACAGGCTCAGCACTGACGGAATCATGCTGAGAGTGACTGGGTTTTCTAAGCCTTTTCCCACATGGAGGTTTCCATGCCTTTGATAGCTGCTTTAAAATGTCTGACGGCAGCATTTGTATGTTAGATGGAAAATGTGTGTTCTGTAATCATTCCCTTTCCTGTAATTCATCTTCATAGGCATTGGAACTTTGTCAAAAACAGCATTTAAACCAGCCTAAAATATGAAGAATGTGTTGTTACACGTGAGGTTATGTGACTAATTTATTCATTTGTAATATCATTCTTTAAAGCATTTTCTAGTGACAAAAATGGTTTTTAGTCAATTCATACATGTGAAATAAGAGATGTTTGTTGGTTTTGTGTCAGCATCTTAAAACTGTTGGAGGCTGTCTTCAGGGAAAAGTCCTCTTCTAAACCCTAGGAGATCTTTTCATGTGGTGGACCTCCAGATCTCATGCATTTTTCATGGCTGACTTCACTTCCATGGCTGCTTCCAGTCTGCGGCTCTACCTCATAGTTCTTCAAAAGATTTGGACAGTGAGAAGTAGACGGGGAAGCTGAGAGAGAGAGAAAGGAGGAACAGGTCGGGGAAACGGCACAGGATGGACCCAAACCTATGTTCCTATGAGCACGTGCACCACCCACTGTGCCATGGCTCCAACAGCTACAGAGGAAATTGAAAGAGACATGAAAAACACAACTCAAAAAGTGGGTCATTTGGAAATAAAAAGGATGTCTGTTTTAAAGAAATGAAATAAATTTCAAGAATATAAATACAGAGCAAAGCACAGAATATATGATGATGTTCCACCTTTCTCGAAAGCTCTCAGGAGGTATAAGGAAGGAATGGGGACATGGTCTAACAAGGCGAATGGTATGATTGAAGACCACAAATATTTAAAATCCACCTGAAACAGGTTTTAGTCTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU554781 True 1275 lncRNA 0.39 2 4827554 4834064

Neighbor

gene id symbol gene type direction distance location
CI01000339_04773830_04777717 NA coding downstream 49532 4772981 ~ 4778022 (-)
CI01000339_04742986_04767624 NA coding downstream 57260 4742828 ~ 4770294 (-)
CI01000339_04739732_04740796 NA coding downstream 86570 4739575 ~ 4740984 (-)
CI01000339_04734544_04737942 NA coding downstream 89313 4734144 ~ 4738241 (-)
CI01000339_04723905_04731220 NA coding downstream 96334 4723510 ~ 4731220 (-)
CI01000339_04841245_04848286 TRAF2A coding upstream 6195 4840259 ~ 4848286 (-)
CI01000339_04889425_04898489 NPDC1B coding upstream 55136 4889200 ~ 4898489 (-)
CI01000339_04915744_04930094 FAM129BB coding upstream 81680 4915744 ~ 4930094 (-)
CI01000339_04955181_04994715 NA coding upstream 120801 4954865 ~ 4994835 (-)
CI01000339_05009812_05012651 NA coding upstream 175704 5009768 ~ 5014163 (-)
G483576 NA non-coding downstream 39665 4787689 ~ 4787889 (-)
G483567 NA non-coding downstream 121865 4705469 ~ 4705689 (-)
G483560 NA non-coding downstream 134123 4692202 ~ 4693431 (-)
G483545 NA non-coding downstream 148884 4669689 ~ 4678670 (-)
G483526 NA non-coding downstream 188640 4638502 ~ 4638914 (-)
G483609 NA non-coding upstream 44642 4878706 ~ 4879251 (-)
G483610 NA non-coding upstream 45276 4879340 ~ 4879555 (-)
G483480 NA non-coding upstream 46464 4880528 ~ 4881743 (-)
G483614 NA non-coding upstream 70773 4904837 ~ 4910813 (-)
G484405 NA non-coding upstream 343089 5177153 ~ 5177568 (-)
G483512 NA other downstream 208829 4618112 ~ 4618725 (-)
G483509 NA other downstream 214236 4612852 ~ 4613318 (-)
G483285 NA other downstream 657052 4125258 ~ 4170502 (-)
G483199 NA other downstream 1049003 3777891 ~ 3778551 (-)
G483104 NA other downstream 1414563 3394108 ~ 3401228 (-)
G483481 NA other upstream 17693 4851757 ~ 4853447 (-)
G484394 NA other upstream 422503 5274086 ~ 5274270 (-)
G484702 NA other upstream 1189668 6021828 ~ 6024822 (-)
G484645 NA other upstream 1420267 6254331 ~ 6256112 (-)
G484826 NA other upstream 2166829 7000893 ~ 7004773 (-)

Expression


Co-expression Network