Gene
RNA
| Item | Value |
|---|---|
| gene id | G483614 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 4904837 ~ 4910813 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU554912 | True | 5851 | lncRNA | 0.35 | 3 | 4904837 | 4910813 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_04889425_04898489 | NPDC1B | coding | downstream | 6348 | 4889200 ~ 4898489 (-) |
| CI01000339_04841245_04848286 | TRAF2A | coding | downstream | 56551 | 4840259 ~ 4848286 (-) |
| CI01000339_04773830_04777717 | NA | coding | downstream | 126815 | 4772981 ~ 4778022 (-) |
| CI01000339_04742986_04767624 | NA | coding | downstream | 134543 | 4742828 ~ 4770294 (-) |
| CI01000339_04739732_04740796 | NA | coding | downstream | 163853 | 4739575 ~ 4740984 (-) |
| CI01000339_04915744_04930094 | FAM129BB | coding | upstream | 4931 | 4915744 ~ 4930094 (-) |
| CI01000339_04955181_04994715 | NA | coding | upstream | 44052 | 4954865 ~ 4994835 (-) |
| CI01000339_05009812_05012651 | NA | coding | upstream | 98955 | 5009768 ~ 5014163 (-) |
| CI01000339_05022538_05028211 | NA | coding | upstream | 111725 | 5022538 ~ 5028211 (-) |
| CI01000339_05038610_05044559 | MAN1B1, MAN1B1B | coding | upstream | 127478 | 5038291 ~ 5044559 (-) |
| G483480 | NA | non-coding | downstream | 23094 | 4880528 ~ 4881743 (-) |
| G483610 | NA | non-coding | downstream | 25282 | 4879340 ~ 4879555 (-) |
| G483609 | NA | non-coding | downstream | 25586 | 4878706 ~ 4879251 (-) |
| G483493 | NA | non-coding | downstream | 70773 | 4827554 ~ 4834064 (-) |
| G483576 | NA | non-coding | downstream | 116948 | 4787689 ~ 4787889 (-) |
| G484405 | NA | non-coding | upstream | 266340 | 5177153 ~ 5177568 (-) |
| CI01000339_05286494_05309122 | GRIN1 | non-coding | upstream | 284180 | 5286050 ~ 5309342 (-) |
| CI01000339_05254264_05259467 | NA | non-coding | upstream | 345158 | 5254264 ~ 5259654 (-) |
| G484436 | NA | non-coding | upstream | 450103 | 5360916 ~ 5361470 (-) |
| G484452 | NA | non-coding | upstream | 478956 | 5389769 ~ 5389979 (-) |
| G483481 | NA | other | downstream | 51390 | 4851757 ~ 4853447 (-) |
| G483512 | NA | other | downstream | 286112 | 4618112 ~ 4618725 (-) |
| G483509 | NA | other | downstream | 291519 | 4612852 ~ 4613318 (-) |
| G483285 | NA | other | downstream | 734335 | 4125258 ~ 4170502 (-) |
| G483199 | NA | other | downstream | 1126286 | 3777891 ~ 3778551 (-) |
| G484394 | NA | other | upstream | 345754 | 5274086 ~ 5274270 (-) |
| G484702 | NA | other | upstream | 1112919 | 6021828 ~ 6024822 (-) |
| G484645 | NA | other | upstream | 1343518 | 6254331 ~ 6256112 (-) |
| G484826 | NA | other | upstream | 2090080 | 7000893 ~ 7004773 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| striped catfish (Pangasianodon hypophthalmus) | G129023 | NA | non-coding | NC_047602.1 | CM018548.1 | 7816467 ~ 7817147 (-) |
