Gene
RNA
| Item | Value |
|---|---|
| gene id | G484405 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 5177153 ~ 5177568 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555837 | True | 317 | lncRNA | 0.40 | 2 | 5177153 | 5177568 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_05046629_05063011 | NA | coding | downstream | 114142 | 5045877 ~ 5063011 (-) |
| CI01000339_05038610_05044559 | MAN1B1, MAN1B1B | coding | downstream | 132594 | 5038291 ~ 5044559 (-) |
| CI01000339_05022538_05028211 | NA | coding | downstream | 148942 | 5022538 ~ 5028211 (-) |
| CI01000339_05009812_05012651 | NA | coding | downstream | 162990 | 5009768 ~ 5014163 (-) |
| CI01000339_04955181_04994715 | NA | coding | downstream | 182318 | 4954865 ~ 4994835 (-) |
| CI01000339_05212333_05226259 | EHMT1A | coding | upstream | 34244 | 5211812 ~ 5226259 (-) |
| CI01000339_05228715_05234656 | NA | coding | upstream | 50850 | 5228418 ~ 5234656 (-) |
| CI01000339_05236618_05236983 | NA | coding | upstream | 58932 | 5236500 ~ 5236983 (-) |
| CI01000339_05238728_05239733 | NA | coding | upstream | 60688 | 5238256 ~ 5239733 (-) |
| CI01000339_05240700_05241683 | NA | coding | upstream | 62750 | 5240318 ~ 5241683 (-) |
| G483614 | NA | non-coding | downstream | 266340 | 4904837 ~ 4910813 (-) |
| G483480 | NA | non-coding | downstream | 295410 | 4880528 ~ 4881743 (-) |
| G483610 | NA | non-coding | downstream | 297598 | 4879340 ~ 4879555 (-) |
| G483609 | NA | non-coding | downstream | 297902 | 4878706 ~ 4879251 (-) |
| G483493 | NA | non-coding | downstream | 343089 | 4827554 ~ 4834064 (-) |
| CI01000339_05286494_05309122 | GRIN1 | non-coding | upstream | 17425 | 5286050 ~ 5309342 (-) |
| CI01000339_05254264_05259467 | NA | non-coding | upstream | 78403 | 5254264 ~ 5259654 (-) |
| G484436 | NA | non-coding | upstream | 183348 | 5360916 ~ 5361470 (-) |
| G484452 | NA | non-coding | upstream | 212201 | 5389769 ~ 5389979 (-) |
| G484458 | NA | non-coding | upstream | 227762 | 5405330 ~ 5405546 (-) |
| G483481 | NA | other | downstream | 323706 | 4851757 ~ 4853447 (-) |
| G483512 | NA | other | downstream | 558428 | 4618112 ~ 4618725 (-) |
| G483509 | NA | other | downstream | 563835 | 4612852 ~ 4613318 (-) |
| G483285 | NA | other | downstream | 1006651 | 4125258 ~ 4170502 (-) |
| G483199 | NA | other | downstream | 1398602 | 3777891 ~ 3778551 (-) |
| G484394 | NA | other | upstream | 78999 | 5274086 ~ 5274270 (-) |
| G484702 | NA | other | upstream | 846164 | 6021828 ~ 6024822 (-) |
| G484645 | NA | other | upstream | 1076763 | 6254331 ~ 6256112 (-) |
| G484826 | NA | other | upstream | 1823325 | 7000893 ~ 7004773 (-) |
