XLOC_013527


Basic Information

Item Value
gene id XLOC_013527
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 34227352 ~ 34227899 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027369
AGGAGGTCCATTCCCACAGCGGTAGTTGGGCACAGCCTCGTCCTGGCCTGTCAGGAAGGTGAGTGTTCCCTCCACAGCTTTGGAAATGGTAAAGCAGGAGTCATAGATGACATAACCCAGCTCAGTTTTGGGTAACAGATCTGTTCTGCTGTTAATCTCTTTCAGAGCAAACAACATGGTCTGAGCCCAGCGGAATGCGCGGAAGTTAAAGCTGAGGGGGAATTCACATGTTACAATTTAACACTGTActtgttcttgttgttgtttactAGACATTATTCTATAACTATGATGTATTCCTGTGTTTATTACAGTTTGTTTAAGTTAATCTTTTGTCCTCTACAAATTACTTTCtagaacttttgttttgtttttatacccCTTTTTATTGCTTGTTTCATTTAGAATCCCAGATCACAAACAATATTCATGAGAGAGTTAAACTCTACTATTTCATGAACACTTCACAACATACCtaagaattataaataaataaatggttgaataaataaataaacaaatgattgaataaacaaataaacatataa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027369 True 548 lncRNA 0.36 1 34227352 34227899

Neighbor

gene id symbol gene type direction distance location
XLOC_013526 slc33a1 coding downstream 56072 34158178 ~ 34171280 (-)
XLOC_013525 C18H3orf33 coding downstream 70560 34146007 ~ 34156792 (-)
XLOC_013524 plch1 coding downstream 84163 33981474 ~ 34143189 (-)
XLOC_013523 olfcr1 coding downstream 247659 33970385 ~ 33979693 (-)
XLOC_013522 NA coding downstream 277493 33946342 ~ 33949859 (-)
XLOC_013528 ssr3 coding upstream 314626 34542525 ~ 34549758 (-)
XLOC_013529 NA coding upstream 323629 34551528 ~ 34554617 (-)
XLOC_013530 NA coding upstream 658341 34886240 ~ 34888072 (-)
XLOC_013531 NA coding upstream 1023399 35251298 ~ 35254022 (-)
XLOC_013532 CABZ01040999.1 coding upstream 1147330 35375229 ~ 35390735 (-)
XLOC_013384 BX323829.1 misc downstream 14685121 19542102 ~ 19542231 (-)
XLOC_013521 NA non-coding downstream 430740 33782464 ~ 33796612 (-)
XLOC_013520 CU463109.1 non-coding downstream 492102 33714357 ~ 33735250 (-)
XLOC_013514 NA non-coding downstream 1179908 33042762 ~ 33047444 (-)
XLOC_013513 NA non-coding downstream 1187495 33037834 ~ 33039857 (-)
XLOC_013536 CU138549.1 non-coding upstream 1345282 35573181 ~ 35573295 (-)
XLOC_013541 BX950224.1 non-coding upstream 2227408 36455307 ~ 36465466 (-)

Expression


Co-expression Network