Gene
RNA
| Item | Value |
|---|---|
| gene id | G484541 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 5574126 ~ 5574564 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU556000 | True | 439 | lncRNA | 0.27 | 1 | 5574126 | 5574564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_05522752_05535461 | NA | coding | downstream | 38461 | 5522733 ~ 5535665 (-) |
| CI01000339_05387768_05396589 | CFAP77 | coding | downstream | 177537 | 5387695 ~ 5396589 (-) |
| CI01000339_05381662_05386593 | BARHL1, BARHL1A | coding | downstream | 187533 | 5381290 ~ 5386593 (-) |
| CI01000339_05329216_05330546 | NA | coding | downstream | 243580 | 5329140 ~ 5330546 (-) |
| CI01000339_05286494_05309122 | GRIN1 | coding | downstream | 264784 | 5286050 ~ 5309342 (-) |
| CI01000339_05584421_05594083 | BCO2A, BCO2 | coding | upstream | 9575 | 5584139 ~ 5594083 (-) |
| CI01000339_05595943_05596416 | NA | coding | upstream | 20765 | 5595329 ~ 5596416 (-) |
| CI01000339_05624136_05625750 | NA | coding | upstream | 49156 | 5623720 ~ 5625750 (-) |
| CI01000339_05627087_05634310 | ZBTB44 | coding | upstream | 52523 | 5627087 ~ 5634365 (-) |
| CI01000339_05639652_05652636 | ADAMTS8A | coding | upstream | 63395 | 5637959 ~ 5652830 (-) |
| G484537 | NA | non-coding | downstream | 7717 | 5566086 ~ 5566409 (-) |
| G484536 | NA | non-coding | downstream | 8466 | 5565368 ~ 5565660 (-) |
| G484535 | NA | non-coding | downstream | 9228 | 5564503 ~ 5564898 (-) |
| G484534 | NA | non-coding | downstream | 9915 | 5563939 ~ 5564211 (-) |
| G484533 | NA | non-coding | downstream | 10359 | 5563064 ~ 5563767 (-) |
| G484544 | NA | non-coding | upstream | 4342 | 5578906 ~ 5579162 (-) |
| G484587 | NA | non-coding | upstream | 174816 | 5749380 ~ 5749955 (-) |
| G484683 | NA | non-coding | upstream | 262262 | 5836826 ~ 5837063 (-) |
| G484684 | NA | non-coding | upstream | 263009 | 5837573 ~ 5837789 (-) |
| G484659 | NA | non-coding | upstream | 284244 | 5858808 ~ 5861203 (-) |
| G484394 | NA | other | downstream | 299856 | 5274086 ~ 5274270 (-) |
| G483481 | NA | other | downstream | 720679 | 4851757 ~ 4853447 (-) |
| G483512 | NA | other | downstream | 955401 | 4618112 ~ 4618725 (-) |
| G483509 | NA | other | downstream | 960808 | 4612852 ~ 4613318 (-) |
| G483285 | NA | other | downstream | 1403624 | 4125258 ~ 4170502 (-) |
| G484702 | NA | other | upstream | 449168 | 6021828 ~ 6024822 (-) |
| G484645 | NA | other | upstream | 679767 | 6254331 ~ 6256112 (-) |
| G484826 | NA | other | upstream | 1426329 | 7000893 ~ 7004773 (-) |
