Gene
RNA
| Item | Value |
|---|---|
| gene id | G484702 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 6021828 ~ 6024822 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU556179 | False | 576 | lncRNA | 0.48 | 5 | 6021828 | 6024822 |
| TU556180 | True | 711 | TUCP | 0.43 | 4 | 6023732 | 6024822 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_05987848_05990050 | TCNL | coding | downstream | 31750 | 5987718 ~ 5990078 (-) |
| CI01000339_05984460_05985628 | NA | coding | downstream | 36172 | 5984331 ~ 5985656 (-) |
| CI01000339_05935601_05965650 | C2CD2L | coding | downstream | 56178 | 5935360 ~ 5965650 (-) |
| CI01000339_05932828_05933256 | H2AFX, H2AFX.L, HIST1H2AH, HIST1H2AJ | coding | downstream | 88572 | 5932698 ~ 5933256 (-) |
| CI01000339_05917956_05923087 | ARCN1 | coding | downstream | 97816 | 5917900 ~ 5924012 (-) |
| CI01000339_06044422_06045535 | IFT22 | coding | upstream | 19527 | 6044349 ~ 6046046 (-) |
| CI01000339_06049238_06060176 | NA | coding | upstream | 24416 | 6049238 ~ 6060359 (-) |
| CI01000339_06102824_06169802 | SPNS2 | coding | upstream | 78002 | 6102824 ~ 6169802 (-) |
| CI01000339_06193430_06204965 | SPNS3 | coding | upstream | 168280 | 6193102 ~ 6205388 (-) |
| CI01000339_06235679_06237223 | CYB5D2 | coding | upstream | 210619 | 6235441 ~ 6237612 (-) |
| G484659 | NA | non-coding | downstream | 160625 | 5858808 ~ 5861203 (-) |
| G484684 | NA | non-coding | downstream | 184039 | 5837573 ~ 5837789 (-) |
| G484683 | NA | non-coding | downstream | 184765 | 5836826 ~ 5837063 (-) |
| G484587 | NA | non-coding | downstream | 271873 | 5749380 ~ 5749955 (-) |
| G484544 | NA | non-coding | downstream | 442666 | 5578906 ~ 5579162 (-) |
| G484707 | NA | non-coding | upstream | 181 | 6025003 ~ 6027258 (-) |
| G484632 | NA | non-coding | upstream | 16985 | 6041807 ~ 6044025 (-) |
| G484710 | NA | non-coding | upstream | 42670 | 6067492 ~ 6067961 (-) |
| G484660 | NA | non-coding | upstream | 231807 | 6256629 ~ 6257120 (-) |
| G484653 | NA | non-coding | upstream | 236641 | 6261463 ~ 6261714 (-) |
| G484394 | NA | other | downstream | 747558 | 5274086 ~ 5274270 (-) |
| G483481 | NA | other | downstream | 1168381 | 4851757 ~ 4853447 (-) |
| G483512 | NA | other | downstream | 1403103 | 4618112 ~ 4618725 (-) |
| G483509 | NA | other | downstream | 1408510 | 4612852 ~ 4613318 (-) |
| G483285 | NA | other | downstream | 1851326 | 4125258 ~ 4170502 (-) |
| G484645 | NA | other | upstream | 229509 | 6254331 ~ 6256112 (-) |
| G484826 | NA | other | upstream | 976071 | 7000893 ~ 7004773 (-) |
