XLOC_013531


Basic Information

Item Value
gene id XLOC_013531
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 35251298 ~ 35254022 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027372
TTTGTAATGCAGGTTTATTTAAACAAGTATTTTACATATGAACAGTTAAGTTGTGTCACATTACATACACTGTCAACGCATATGATGTGAAGGCATCGTTTTTTCGCAGCTCTACAGTGACCTCTAGTGGCCGTCTGAGGCATTTTAACCTCCAAATATTACATCAGCAGGACACGTCTGTCGGAGCATCAAATGCCAACAGTTCTAGTCCAAAAGTCCTATCATTTACCACATGATGACAGCATTATAAATGCCAAGAAAGGTATGATGTCATTTCTTTACGAAATCTGTTATTCGAGGAGAATCTCAGGAGATCTACTCTAAGGGTACAAAATCTTTTCAACGCATACACAGAATAACCTACTACATAAAGACAAAATGAAGCCTAAAAGCGTATTGTACTCTGCTCTAAAGAAACTGGAAAAACAAGTTGAAATTTAAAACTTAAAGACCTGTTCACACCAAGCGTGTTCACTGAAATGCTACATATAGCTtaaaaaatgctccactatttaCAATAATAGCCCACATTTGTAGACTGGAAAAGTcagatttctttaaataaataccacattcATAGGAAAACTGATTTAAACAGTAAATAATGAACTATAAAGAGCTGCTGCTGTGGGCTCAGATAAAAACATTATTATAGGACTCAGAATCCATCCTGCATTGTAGAGCACTGAAAGCAACACTGCAGCATTTGTTGGTGTGAAAACTGTACAGTTACCATTTTTGGAATGAACAGGGTTTACCACTAAAAGCTCAAAGTTTGATTTAGTCCCCTActtctgtcatttttttaatcttaagTATTTCAAAGTAAGGATCACCACATTTCAATTTAAAGGAATAGTCCAACCAAACATTCTGCCATTTACCCATCTTCTAGCTGCTGCAAACAatgcttcagttttttttttcttctgttgaacaggcATCCATTTTTTTTGGATGGCtgctattttcaaatattttttcaattttctttCCGATAATAAAGTTTAGaatcacttgagtgtgagtaaatgttgagGAAATCGTCAAATTGCttaagtgaactattcctttcataacaaattaagaagtgaaaaaaaaagaaaaaaataagagtgATTATTTTTCTTTGCAAGGATGTTGTGGAATTGATTATAAAAATAGACTACTGTTACTCAATCCAATGGTTATTTTATTCAGCATTTCTTGGCCATAATGCAGATGCGAGTATcacattataaatattataaaag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027372 True 1253 lncRNA 0.34 2 35251298 35254022

Neighbor

gene id symbol gene type direction distance location
XLOC_013530 NA coding downstream 363226 34886240 ~ 34888072 (-)
XLOC_013529 NA coding downstream 696681 34551528 ~ 34554617 (-)
XLOC_013528 ssr3 coding downstream 701540 34542525 ~ 34549758 (-)
XLOC_013527 NA coding downstream 1023399 34227352 ~ 34227899 (-)
XLOC_013526 slc33a1 coding downstream 1080018 34158178 ~ 34171280 (-)
XLOC_013532 CABZ01040999.1 coding upstream 121207 35375229 ~ 35390735 (-)
XLOC_013533 snrpa coding upstream 148737 35402759 ~ 35407790 (-)
XLOC_013534 itpkcb coding upstream 175311 35429333 ~ 35459996 (-)
XLOC_013535 ryr1b coding upstream 237451 35491473 ~ 35736591 (-)
XLOC_013536 CU138549.1 coding upstream 319159 35573181 ~ 35573295 (-)
XLOC_013384 BX323829.1 misc downstream 15709067 19542102 ~ 19542231 (-)
XLOC_013522 NA non-coding downstream 1301439 33946342 ~ 33949859 (-)
XLOC_013521 NA non-coding downstream 1454686 33782464 ~ 33796612 (-)
XLOC_013541 BX950224.1 non-coding upstream 1201285 36455307 ~ 36465466 (-)
XLOC_013542 NA non-coding upstream 1460617 36714639 ~ 36733902 (-)
XLOC_013543 NA non-coding upstream 1595127 36849149 ~ 36887469 (-)
XLOC_013544 NA non-coding upstream 1647999 36902021 ~ 36918987 (-)

Expression


Co-expression Network