G484943


Basic Information

Item Value
gene id G484943
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 6815204 ~ 6817063 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU556453
CAGAAGATCATTATTTTTGTCAAGAAATCCAACAACTGAGTAAGTAACTTCTCCGGCATAGTGTAGGAGTCGAAAATCCCCTCGTTCCAAGGTCTTGCGTGTTTTCTGGTCAGCCAATTTGTGCGTGACAAAATGAGGGTGACCGCACATCTTCTCCTCTAGCTTCTCCAGGAATGTAAAATCTGTGGCTTCTCCAGGACGCAGGCATTCTTCATCCAGTACTGATATGATGCCTCTATGTTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU556453 True 246 lncRNA 0.45 4 6815204 6817063

Neighbor

gene id symbol gene type direction distance location
CI01000339_06779978_06786701 SVOP coding downstream 28503 6779844 ~ 6786701 (-)
CI01000339_06770289_06776849 SSH1B, SSH1 coding downstream 38355 6770085 ~ 6776849 (-)
CI01000339_06753621_06757973 CORO1CB, CORO1C, CORO1CA, COR1C coding downstream 57231 6752018 ~ 6757973 (-)
CI01000339_06747841_06748719 NA coding downstream 65383 6747288 ~ 6749821 (-)
CI01000339_06736326_06742993 PKN3 coding downstream 72211 6735893 ~ 6742993 (-)
CI01000339_06867675_06873093 NA coding upstream 50142 6867205 ~ 6873093 (-)
CI01000339_06883625_06889375 CABP7, CABP7B coding upstream 65992 6883055 ~ 6890499 (-)
CI01000339_06917949_06919576 NA coding upstream 100132 6917195 ~ 6919576 (-)
CI01000339_06946465_06948712 MYHZ2 coding upstream 129338 6946401 ~ 6949328 (-)
CI01000339_06968980_06974513 MYHZ1.1, MYHZ1.2, MYHM86-1, MYHC4, MYHB, MYHZ2 coding upstream 151917 6968980 ~ 6974513 (-)
G484870 NA non-coding downstream 81025 6733772 ~ 6734179 (-)
CI01000339_06655858_06658182 DPM2 non-coding downstream 157686 6655294 ~ 6658182 (-)
G484804 NA non-coding downstream 323287 6491716 ~ 6491917 (-)
G484801 NA non-coding downstream 330348 6484622 ~ 6484856 (-)
G484641 NA non-coding downstream 342685 6470855 ~ 6472519 (-)
G484871 NA non-coding upstream 180748 6997811 ~ 6998975 (-)
G484826 NA non-coding upstream 183830 7000893 ~ 7004773 (-)
G484991 NA non-coding upstream 271958 7089021 ~ 7089385 (-)
G485000 NA non-coding upstream 306762 7123825 ~ 7124186 (-)
G484854 NA non-coding upstream 365156 7182219 ~ 7312927 (-)
G484645 NA other downstream 559092 6254331 ~ 6256112 (-)
G484702 NA other downstream 790382 6021828 ~ 6024822 (-)
G484394 NA other downstream 1540934 5274086 ~ 5274270 (-)
G483481 NA other downstream 1961757 4851757 ~ 4853447 (-)
G483512 NA other downstream 2196479 4618112 ~ 4618725 (-)

Expression


Co-expression Network