G484854


Basic Information

Item Value
gene id G484854
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 7182219 ~ 7312927 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU556347
TCTCCCAAATTTATTTATTTATTGGTCTAGTAATTAAATAAAGAAGTCACATACATACATACTACACAAAACATGCCTAGGAAGACTGTGCACTCTATCACATTTAATAGATTATCTCATAAGTTGTGGTTGTGTCACAAAACATGCAGACAAAACATATGCTGACTAATCAAAAAGCAATAAATGCTCACAGTATGTGTGTGGCTCAAATGTTCTGTAAGCACTGTGGGATTGTACAGTGATCACATATTTCAACCTGCCATCCTGCACATTCTCAACACATTTAGACATTTCCTGTTCACTCGTCATGGCAGTGCTGAAAGTCTCAGCTGTCTGTGAGAGAGTAAGAGACAGAGATAAAGCAATAGAGACAAACTGAGTGAGAGAAGAGGTTGCCACTGATATATTTTTCTCAATCAGTCCTTTAGAAATATTGATCTGGCTGGTGCACATAATATTGTACATTCTAATGAACAAATTGGTGAGTATTTTGTAACTCAGAAGACAGATCTTTCCTATGATGATTAAGTAGCACTAAAACAGCATAATTATTATTGCATTGTTGTTGCCCAGTGTGTGCTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTCTGTTGTTTGTTCAATGTTTGACATACACAAAGCCAAAACGTAACATATAATACATTTTATTTTACAAAATGAAACTACTAAAATATGCATAAAATGTCTTTGCTCCATATTTGTTATTTGCCATTCACCTCAAAAAATTGAAGTTTGAATATGACACTTCACAAGAACTGAAGTCTGTTAAATATTATAAAATAAAAACAAACATATCAGATATGTACAGTAGGACAGAAACATATTTACACTATATACAGTAAAAAGGGGTATGAATATTGAATTATAGTGAAAATGGTAAATATATATATATATATATATATATATATATATATATATATATATATAGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU556347 True 1017 lncRNA 0.31 3 7182219 7312927

Neighbor

gene id symbol gene type direction distance location
CI01000339_07082365_07085238 NTMT1 coding downstream 96850 7081556 ~ 7085369 (-)
CI01000339_07062220_07073959 NA coding downstream 108260 7060881 ~ 7073959 (-)
CI01000339_07035942_07039033 MGC78985, NCS1A, NCS1B, NCS1.L, NCS1 coding downstream 143186 7035942 ~ 7039033 (-)
CI01000339_07023718_07029434 FBXW2 coding downstream 152785 7022252 ~ 7029434 (-)
CI01000339_07009961_07010749 NA coding downstream 170617 7009894 ~ 7011602 (-)
CI01000339_07323037_07323778 NA coding upstream 9737 7322664 ~ 7324233 (-)
CI01000339_07331830_07342029 NA coding upstream 18626 7331553 ~ 7342219 (-)
CI01000339_07374562_07376423 MGC53997, TUBB4B, TUBB4A, TUBB, TUBB4B.L, TBB2C, TUBB2B coding upstream 61489 7374416 ~ 7376722 (-)
CI01000339_07382447_07388182 GLIPR2 coding upstream 69520 7382447 ~ 7388182 (-)
CI01000339_07465773_07468005 NA coding upstream 152031 7464958 ~ 7468005 (-)
G485000 NA non-coding downstream 58033 7123825 ~ 7124186 (-)
G484991 NA non-coding downstream 92834 7089021 ~ 7089385 (-)
G484826 NA non-coding downstream 177446 7000893 ~ 7004773 (-)
G484871 NA non-coding downstream 183244 6997811 ~ 6998975 (-)
G484943 NA non-coding downstream 365156 6815204 ~ 6817063 (-)
G485034 NA non-coding upstream 16371 7329298 ~ 7330158 (-)
G485035 NA non-coding upstream 20600 7333527 ~ 7334274 (-)
G485038 NA non-coding upstream 24583 7337510 ~ 7337713 (-)
G485045 NA non-coding upstream 38563 7351490 ~ 7351698 (-)
G484645 NA other downstream 926107 6254331 ~ 6256112 (-)
G484702 NA other downstream 1157397 6021828 ~ 6024822 (-)
G484394 NA other downstream 1907949 5274086 ~ 5274270 (-)
G483481 NA other downstream 2328772 4851757 ~ 4853447 (-)

Expression


Co-expression Network