CI01000340_00023459_00027830


Basic Information

Item Value
gene id CI01000340_00023459_00027830
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 22938 ~ 27830 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_00023459_00027830.mRNA
ATGACGACCACCACCACTTATCAAGGCATGGATCCGACTGCGAGGAGCAGCTCCAGAGTGCTGCGTCCACCAGGTGGAGGTTCAAACATCTGCTTTGGCACAGAGGAAGAGAAACCTGTGAAAAAAAACAAAATGGCATCTAGCATATTTGCTGAACCCGAGGACCCTCACGCCCATCGGAGGAACAATCCGCCAGATAGCGCAGAAGAACTTAAACCTGTTCAGGAGCAGCATGACACACCAGCTCCTCCTTGCCTCTCTGCAACAGAGCAGCCTGCAGCTGGGCTTCCTTCTGGCCGTAGAAACCCACCGGGGGGCAAATCCTCTCTCATCTTAGGCTAAAGCATTGCCGCACTTAAGGATAAGATCTGGGCCTATGTGAAACAAGCATCTCAGAGTAAATGTGCTGTTCTGTAGTCAGTGCTCATCCTCTGCATAACTGTATTCATAAAATGACATAAAGCCACAAAGAACTGATTCAGATCGGGGCAATTTTGTCAGAGCGTGCCACAAATCTGAGCTGTGATTTGTTCAAAGAATGTCTTTGAATATGTTGAGTGTTGGTCTCTCAGTCTTGTGTCAACTAAAGACCCTTTAGGAAAAACAAATCCTATGTATGCACTGCTACTCTCAGATTCTACAAACCACAGGCCACAATTTGCCATCAAAGTTCTTAACATTCAACATTTAGAAGGTTAAACTGCATTCACGTAAGCCTAAGAAATGTGTCCCTGATTGAGTGTTTGTCTCCCTTTTCATGTATTAAGTTTTTGTCAGCACTTTATGAACTGTGGTGCCCAATTTGCGGTGCCTCAGACCTGCTGGTTAAGACACAAAGTTTCACATCCATCACTGCGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_00023459_00027830.mRNA True 863 mRNA 0.46 3 22938 27830

Neighbor

gene id symbol gene type direction distance location
CI01000340_00031137_00033754 SUMO3, SUMO2 coding upstream 2950 30780 ~ 33754 (-)
CI01000340_00035016_00043632 NA coding upstream 7186 35016 ~ 44034 (-)
CI01000340_00062787_00080635 NA coding upstream 34950 62780 ~ 82095 (-)
CI01000340_00095106_00097863 NA coding upstream 67216 95046 ~ 97863 (-)
CI01000340_00100271_00103531 NA coding upstream 72218 100048 ~ 103531 (-)
G485360 NA non-coding downstream 2706 19983 ~ 20232 (-)
G485753 NA non-coding upstream 19722 47552 ~ 48064 (-)
G485744 NA non-coding upstream 30053 57883 ~ 60043 (-)
G485745 NA non-coding upstream 32355 60185 ~ 118368 (-)
G485771 NA non-coding upstream 79055 106885 ~ 113896 (-)
G485775 NA non-coding upstream 113381 141211 ~ 141449 (-)
G485786 NA other upstream 297504 325334 ~ 325716 (-)
CI01000340_00787534_00791061 NA other upstream 758721 786551 ~ 791409 (-)
G487884 NA other upstream 1867971 1895801 ~ 1902272 (-)
G488782 NA other upstream 3977975 4005805 ~ 4006448 (-)

Expression


Co-expression Network