CI01000340_00062787_00080635


Basic Information

Item Value
gene id CI01000340_00062787_00080635
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 62780 ~ 82095 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_00062787_00080635.mRNA
AAAACCGGGCCGATGTTAGTTGAAAGCTAAAACTGTAGTGTTAATGTGCCGGTCAAAGTTGTTTTTTTTTTTGTTTTTTTCTGTCAGTTCACAGATTAACTAACGTTAACATTTAAATTTAACGTCAGGTCACAGTTTATAACGTTAGCCAGTGTGTTTCTGTATGTTCACAGTTTAGCTATAACGTTTGCTTTTCGTTGTTTTTTTTTTTCCCAGTCTGTTCATATCAGCATGTGTGAATGTATGTACACGCTTGTGGCTAATGTTAGCATATGTCTCTTTGGTGTATTATTATGGTAACAGTTCAAAAATTTGCTTCTTAAGGTCCATAAGCCAGATGGTGGAACGCTGTCCTGCTCTTTTTACAGAAGATCAGGTGTTCATGGAGTTCAACAGGATTGTGGGAAAGAACCTAAAGCAGGAATTCTATGATAGCATTAATCGACACAGTCTTCATCTAATTGATATCTTTCGATCTAAGAGAGGGAATGTTGGACAGCTGTTCACACCGCTTTCACAACAAACCAGGATTCAAGAGCCAACTGATAATACGTCACTGCTCGGAGGGCTCCCAGTTGTCCTTGGTGACAACCCCACGAACTTCTTCAAAGCATGCTTTGCCTGGATTTCGCCCCAACACTCACTGAAATTTCAGAAGTTAGCGACGGCATTCAGATCGGGGACCAACCTCCCCTTAAAAATGTTCAGAAGCCTCCTCAGCAGTTCCCTGATTGAAGGCCCATGTCCCACCTCGACCGTGACACGAGGGCCGTATTATTCTCAGTGTGATCCATGGCTGCACCAGAGCCCTGGTCTCCTGGAAATCACACCATCTAAATTAGGTGGGAGTGGAACTGGGCTCAGTTTCCAGAAGGCCGCCTCTATCTGTGGGCACAGGACATTCTCCGCTCATAGCACTGCTCCCTCAGGCCATCAGCTGAATCAAGGAGGACAGATGCTCAGTCTTACTCGTGGCACCACTCTGGCAGAACCAGCCGTGGTTCCCAGGAGTAGTTCAGCTGCTGTCAGCAGCACCATGGCCAATCCCACTGAGGAGCTGTTGGACGGCAGGTGCACCCCATCCATGCTTAAAGTATACAGGGCAGCTGTCGTTTCGTACCGCACTCCTATAGCTGGCCGGTCAGCTGGGGAAACATGACATCAAA
>TU557403
TTGGGCATGCCCACCTTCTTGGAAAGTTCAGCGTGTCATCACTCAGTCAGTGATGCCACAACATTGCTCAGATTCTGGTTGTGAAACCGCCAAGATTTTTTTCCGAAGAAATGGGATAAACTTTCACAGGTGAGAATGTGTTAGCTGAATCCTTTGCATTGTTGTGTTAGTTTAGCAAAAATCATCTGCTGAAGTCTATTGCAGATATAGATATTCATACATGCGTCTTACTATGGTTGCAGATGCACTGTCAACTTGCTCTCGAATGTTTACGGAATAGTGTTTTGACCGTTCCAATATGGCTGACAACTTGCATATAGCAGCCCATAGAAACAGCTATTAATGAGACATATATGTTTATATATCTGTGGTTCCAAACCCATAAGACTTTCATTCATCTTCGGTACATAAATGAACACATTTTTAATTAAATCTGAGACATTTCTGTCCCTCCATTGACAGTCAACACAACTACCATTTTTACTCTTCAAAAGTTCATAAAGAGATCGTAAAACAAATCATATGAATCGTGCGGTTTGGTCCAAATTTTCTGTAGAGACACAACTGCTGTATATGATGAAGAGAGTTCATTTAGGCTTTTATTCACATAAACTTTAATTAGCTCACATATCCGTTATGATGAACGGAAGCTCAAGCATGCTTGCTTGATGTGCGAGAACCAGTGAGGTTTATTCTTGTGTGACATGCAGCATGTTTTTGAAGCATCAAAGTGATATGGAGGTACAGAAATCACTGAGATTTTATTAAAAAAATATCTTCACTCTAAACCCGAATTTTGTGTTAATGAAACATTTTAAGTGGTCATTACTTATTCTTTGTTGTTTTTGAAAAAGCATTGCCATTACTAAATCAAATTAGTTGTTTGCAGTAATCAGACGAAATATTGGAAGCACTGATCATGTTAAGCTGTGATAACTCGGAATGTTACGCTTTTGTAAGGGAGGGAGGGGCCTATTGAAACAGGTGACTGACAGTGAGAAGAGCGCACTGTTTGAAGAGTCTGCTCGTCCTGCCCGATGCTGCACGCTAAACATGGATTTTTGAAAGAAACTTTAAACGGTAAGTGTATAAATCTTATCTTTCTGACAAAAGTGATTACCCCAAAACCGGGCCGATGTTAGTTGAAAGCTAAAACTGTAGTGTTAATGTGCCGGTCAAAGTTGTTTTTTTTTTTGTTTTTTTCTGTCAGTTCACAGATTAACTAACGTTAACATTTAAATTTAACGTCAGGTCACAGTTTATAACGTTAGCCAGTGTGTTTCTGTATGTTCACAGTTTAGCTATAACGTTTGCTTTTCGTTGTTTTTTTTTTTCCCAGTCTGTTCATATCAGCATGTGTGAATGTATGTACACGCTTGTGGCTAATGTTAGCATATGTCTCTTTGGTGTATTATTATGGTAACAGTTCAAAAATTTGCTTCTTAAGGTCCATAAGCCAGATGGTGGAACGCTGTCCTGCTCTTTTTACAGAAGATCAGGTGTTCATGGAGTTCAACAGGATTGTGGGAAAGAACCTAAAGCAGGAATTCTATGATAGCATTAATCGACACAGTCTTCATCTAATTGATATCTTTCGATCTAAGAGAGGGAATGTTGGACAGCTGTTCACACCGCTTTCACAACAAACCAGGATTCAAGAGCCAACTGATAATACGTCACTGCTCGGAGGGCTCCCAGTTGTCCTTGGTGACAACCCCACGAACTTCTTCAAAGCATGCTTTGTAAGTAACTCATTTTCTCAAAGGACAATGACAACATAATTCTTTTATTAACTGATAGTCTTTGTGTTTGATAAAATGTGTGCATAGAGCGTTAAGGGTTAGTTCACCCAAAAATAAAATGTCTGTCATTAATTATTTACCCTCATGTCGTCCCAAGCCCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_00062787_00080635.mRNA False 1166 mRNA 0.46 6 62780 80972
TU557403 True 1904 TUCP 0.38 3 79415 82095

Neighbor

gene id symbol gene type direction distance location
CI01000340_00035016_00043632 NA coding downstream 18746 35016 ~ 44034 (-)
CI01000340_00031137_00033754 SUMO3, SUMO2 coding downstream 29026 30780 ~ 33754 (-)
CI01000340_00023459_00027830 NA coding downstream 34950 22938 ~ 27830 (-)
CI01000340_00095106_00097863 NA coding upstream 14074 95046 ~ 97863 (-)
CI01000340_00100271_00103531 NA coding upstream 19076 100048 ~ 103531 (-)
CI01000340_00145063_00147754 MIF4GDA coding upstream 63554 144526 ~ 149098 (-)
CI01000340_00151447_00155343 GRB2A, GRB2B, GRB2, GRB2.S coding upstream 69563 150535 ~ 155343 (-)
CI01000340_00197972_00296049 USP43A coding upstream 117000 197972 ~ 296049 (-)
G485744 NA non-coding downstream 2737 57883 ~ 60043 (-)
G485753 NA non-coding downstream 14716 47552 ~ 48064 (-)
G485360 NA non-coding downstream 42548 19983 ~ 20232 (-)
G485771 NA non-coding upstream 25913 106885 ~ 113896 (-)
G485775 NA non-coding upstream 60239 141211 ~ 141449 (-)
G485796 NA non-coding upstream 270384 351356 ~ 351724 (-)
G485852 NA non-coding upstream 398453 479425 ~ 480779 (-)
G485805 NA non-coding upstream 415705 496677 ~ 499007 (-)
G485786 NA other upstream 244362 325334 ~ 325716 (-)
CI01000340_00787534_00791061 NA other upstream 705579 786551 ~ 791409 (-)
G487884 NA other upstream 1814829 1895801 ~ 1902272 (-)
G488782 NA other upstream 3924833 4005805 ~ 4006448 (-)
G488862 NA other upstream 4426224 4507196 ~ 4518120 (-)

Expression


Co-expression Network