CI01000340_00100271_00103531


Basic Information

Item Value
gene id CI01000340_00100271_00103531
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 100048 ~ 103531 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_00100271_00103531.mRNA
GACAAGACAGACAGAAGATAGAAGACTACAGCCCTCCACACCCGAGAGGAGGAGCCTCTTTAGTTATTCGCTCAGTGCCAAAAGATCCACTCCTGATGATAACAGTGTTTCCCCGTACTCCCTCTCCCCTGTTAACAGCAAAAGTCAGAAGCTGCTGCGGTCGCCAAGAAAGCCGACGCGCAAAATTTCCAAGATTCCATTTAAAGTGCTAGATGCACCAGAGCTACAAGATGACTTCTACCTCAACTTAGTGGACTGGTCCTCTTTAAATGTACTCAGCGTTGGACTGGGAACTTGTGTTTACCTTTGGAGTGCATGCACCAGTCAAGCTAGTCGGAGAGGGGTAATCTTGTCGCTGTGGGTACGCACAAAGGTTTTGTACAAATTTGGGATGCTACCGCTGGCAAAAAGCTATTTGCCTTGGACGGACACACAGCATGTGCGGCTTGTACCTGTGGAAGTGCCTGACAAAATCTGTGGTTGTTCACCAGAGTCATTGAGGGTCAGTCCAGGAAAGACTGTTGCTGTGGTCACAATCAATGCTGTTGGTTTCCTTATTTTTAATAGACTGGCAAGATCTCAGCAGATAGTTTTCAGAAAAGTTGAGTGGGAGAATGTGCGATTCGAGGTGGACAATATATGCAAGGAAGAGCCCTTCATCTGCCCTGCATGCACCCCAGATATGCTTGCAGTTTCCGTAGATGGAAACCGCAAGCATTACCGTTTCAAGAATGCTGCTAGGTACTCCAAACTGTGTGTCACAGTGTTTGTATTAATAAGATAACAAAGCTGAAATTTTAAATAAGTGACACTTTGAGCGCTGTTGAGGGGATTTGTAAACACCTCTGATTGGCCATTGTGTTGACGCGTGTGATGGAAATTTTTTTTCTTCTACAGGCCTAATAAGCTAACTTTGAAATAGAGAAATAGTCACTAGGACTGAGTGTTGTAACAAGTGGAAAAATTCTGCTGTGCTGGCTAGACAGCATCCTTCTAAGGATAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_00100271_00103531.mRNA True 1007 mRNA 0.45 4 100048 103531

Neighbor

gene id symbol gene type direction distance location
CI01000340_00095106_00097863 NA coding downstream 2185 95046 ~ 97863 (-)
CI01000340_00062787_00080635 NA coding downstream 19076 62780 ~ 82095 (-)
CI01000340_00035016_00043632 NA coding downstream 56014 35016 ~ 44034 (-)
CI01000340_00031137_00033754 SUMO3, SUMO2 coding downstream 66294 30780 ~ 33754 (-)
CI01000340_00023459_00027830 NA coding downstream 72218 22938 ~ 27830 (-)
CI01000340_00145063_00147754 MIF4GDA coding upstream 40995 144526 ~ 149098 (-)
CI01000340_00151447_00155343 GRB2A, GRB2B, GRB2, GRB2.S coding upstream 47004 150535 ~ 155343 (-)
CI01000340_00197972_00296049 USP43A coding upstream 94441 197972 ~ 296049 (-)
CI01000340_00300171_00311362 CFAP52 coding upstream 196364 299895 ~ 312018 (-)
CI01000340_00320527_00323526 NA coding upstream 216612 320143 ~ 324010 (-)
G485744 NA non-coding downstream 40005 57883 ~ 60043 (-)
G485753 NA non-coding downstream 51984 47552 ~ 48064 (-)
G485360 NA non-coding downstream 79816 19983 ~ 20232 (-)
G485771 NA non-coding upstream 3354 106885 ~ 113896 (-)
G485775 NA non-coding upstream 37680 141211 ~ 141449 (-)
G485796 NA non-coding upstream 247825 351356 ~ 351724 (-)
G485852 NA non-coding upstream 375894 479425 ~ 480779 (-)
G485805 NA non-coding upstream 393146 496677 ~ 499007 (-)
G485786 NA other upstream 221803 325334 ~ 325716 (-)
CI01000340_00787534_00791061 NA other upstream 683020 786551 ~ 791409 (-)
G487884 NA other upstream 1792270 1895801 ~ 1902272 (-)
G488782 NA other upstream 3902274 4005805 ~ 4006448 (-)
G488862 NA other upstream 4403665 4507196 ~ 4518120 (-)

Expression


Co-expression Network