CI01000340_00312480_00313262


Basic Information

Item Value
gene id CI01000340_00312480_00313262
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 312212 ~ 313534 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_00312480_00313262.mRNA
ATATAAATTGCAATTTTACTTCTATGACACATAACATAACACACAATACTGTATGAGAAAGAATAGTGTGTGTTGTGGAGATATTTTTTTTTAGGCAGTGCTGTTTTTCATAAAGATAGCCACCAGTGCCATTTAGCTGCAGCTTCCATTTTAAATTTCCATTTTTCAACAAATTAGTAAAAGTGTTATCTCTTTGTTATCTTTAATATCTTAATATTAATGTAGTTGTTGTTTTACTTTTATCATTCTTTGAGGTGTGAATTTTTGAATGGTGAAATGTTCGTTTTTCAGAACTGTTCTTAAAGAGATTGGTCTTGCTGATAAAGTCAGCCCAGCAAGGGCTGGGAAGAAGTGGGAAAACCTGAAAATAAAATTTAAGGAACTGAAGCAGCTACCATCAGGTGTGGAGAGCGAGTCAGGGGACACAAATGCAAGGAGCTGGAAGTGGTTTGAGCTGATGAATGAAGCAATTGGTTGGAGGCCATCTATGCAGCCTCCCTTTCTGATTTCTTCAGCATCCCCTACTTATAGTTCCTCAGAGCTGCTTGAAACAGATGACAGCGACCCAGGGTTTAGCCCCTTGCCACCAAAAAGGCAGCATAAGGATCCAGTTTTGGAGTTCCTGGAGAGAGAGGCAGAGCGGTCTGAGGCCAGGGAGAGGAGAGCAGAGGAAAGAGAGGAAAAGTTATTAAACCTGCTGGAGAGAACCGTTGATAAGATGTAAATGTAAAAAAAAAAATAATAATAATAATAATAATAAAAAAAGGTTGTTGTTTTCATATTCTTATTGTTGCAAATACCAATTATTGGTTAACAGTTAAGTATAACTAGTTCATAAGTTATATAATATATTACATACTTTATACAATAATTTGGTGATTTTGTCATTGCATATGTGAAATATAGCCATATTTTACTTTGACAGACATCTTACAACATGTCAAGTTGTTGTTGTTTTTTTTGTTTTTTTTTTGCAATGAAAATAGAGTTTCTTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_00312480_00313262.mRNA False 996 mRNA 0.35 2 312212 313534

Neighbor

gene id symbol gene type direction distance location
CI01000340_00174722_00176216 MCHR1A coding upstream 135708 173735 ~ 176504 (+)
CI01000340_00330446_00342078 STX8 coding downstream 16912 330446 ~ 342078 (+)
CI01000340_00488669_00506008 NA coding downstream 175135 488669 ~ 506802 (+)
CI01000340_00529527_00543895 NA coding downstream 215993 529527 ~ 544508 (+)
CI01000340_00559281_00560682 NA coding downstream 244490 558024 ~ 560682 (+)
CI01000340_00575085_00576868 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 260926 574460 ~ 577456 (+)
G485511 NA non-coding upstream 13772 298017 ~ 298440 (+)
G485438 NA non-coding upstream 67397 192819 ~ 244815 (+)
G485441 NA non-coding upstream 69553 226223 ~ 242659 (+)
G485443 NA non-coding upstream 90930 220756 ~ 221282 (+)
G485437 NA non-coding upstream 120280 191642 ~ 191932 (+)
G485520 NA non-coding downstream 11825 325359 ~ 325695 (+)
G485551 NA non-coding downstream 163095 476629 ~ 476865 (+)
G485564 NA non-coding downstream 258173 571707 ~ 572179 (+)
G485614 NA non-coding downstream 365633 679167 ~ 679379 (+)
G485600 NA non-coding downstream 366789 680323 ~ 681788 (+)
G485427 NA other upstream 144578 163286 ~ 167634 (+)
G485373 NA other upstream 198443 106885 ~ 113769 (+)
CI01000340_02930635_02933799 LSM2 other downstream 2616557 2930635 ~ 2933935 (+)
G487133 NA other downstream 3660381 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 4085885 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 4350775 4659584 ~ 4669322 (+)
G489634 NA other downstream 6380687 6694221 ~ 6700788 (+)

Expression


Co-expression Network