CI01000340_00683967_00684845 (GBG12, GNG12, GNG12.L, GNG12A)


Basic Information

Item Value
gene id CI01000340_00683967_00684845
gene name GBG12, GNG12, GNG12.L, GNG12A
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 682794 ~ 684865 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_00683967_00684845.mRNA
ATGTCATCTAAGATGCAAAGCTCTAATAATATAGCCCAGGCCAGAAGGACTGTTCAACAGCTACGGATAGAAGCTAACATAGAGAGAATAAAGGTGTCTAAAGCTTCTGCAGACCTCATGCATTACTGCAGCGAACATGCCAAGTATGATCCTCTGCTTATGGGCATCCCAGCTTCAGAAAACCCTTTTAAAGATAAAAAGCCCTGCACTATATTGTAGTGGGATACTTGAACTCTTGATGTGTGTTTTGATGTTCCTTTTATTGTTATTTTTTTTTAATAGAGAGAATATGATTCCCTATTCGACTTAAAGTGAACTAAACCCCAAGCCATTATTTGATTGTATCCACAAATCTCCTGACTAGAAATGTTCATGTTTTCCATGAAAAGGAGCGTCAAAGCACCTAGTAAACAAACCATTTGTGGTGCAAAGACAAAACCAACACATGAATGAAGTTTAGTTTTAGGGCACAGCACAGATGAGTTGTTTGCTTTGTGATGGTGTCCATTGATGTGGTTGTGTCTCCTGCACATAAAGGGTGAGGTCAGAGTGGGCGGTTCTCAGCCGCGCTAGTATCAGAAGCACAGGAAATGATCATTTAATGACTGCACTCTGTAATAATTATCTGCAGATAAGCAGAGCCTCATCGGTGGTGCTTTTGACCCCATCTGATGCTTTTAAAGGCATTCAGTTGCAGAGAGTGTGGGGGATTGCTGTGAGGGGTGAAATGTCAGCATCACGAATGTGTGAAGGGTGCTTGTGCTCACTGGAGGAGGAAACAGGTGTCTTTGGAGGCGTCACATTGACGCAATGCTGCTCCGTCCCTCCCTCATTAACTCACTCTTTGAACAATGGACTGATACAAAGCTAACTGCTCCTGTCAAATCACTACACGCAACACCGTGCCCTTTTCTTTTTCTCTCAGTAAACCAAGAGAGCTGTGTTTCAAAAGTTCAACAACTGCCAAAACTTGAAGATTAGCATTTTAAGAGTAATACAAGTAATACAAGATTTTTTCCTTGTTTATTCCTCCCTTTTTTTCCTAACTAACCAGACAAAATGTGGATGACACTTTACAATAAGGTTCAATTCGTTGATATTAGTGCATTAGGAATCATGAACTAGTAGTAATAATTGTTTATTACTACTAGTTCATGATTCCTACATTTATTTTATTTTATTTTTTATTTTTTTTTACAGCATTTAATAATTTAATGTTAATTTATAAATGTACTTCACTATTGCTAGTTGTTAATTCATTCTCACTGATACTATATGAACTAATGTTAATTACGTCAATTTGAAATGTTAAAAATATAGAAGTATACACTACAGTTCGAAGGATCAGTAAGATTAAAAAAAAAAAATACAAAAAAATCTATTTCTAATAAA

Function

symbol description
gng12a Predicted to enable G-protein beta-subunit binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be part of heterotrimeric G-protein complex. Orthologous to human GNG12 (G protein subunit gamma 12).
gng12 Enables PDZ domain binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Located in extracellular exosome.

GO:

id name namespace
GO:0070062 extracellular exosome cellular_component

KEGG:

id description
K04347 GNG12; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_00683967_00684845.mRNA False 1392 mRNA 0.37 2 682794 684845

Neighbor

gene id symbol gene type direction distance location
CI01000340_00641314_00671233 SEC16B coding downstream 11561 641293 ~ 671233 (-)
CI01000340_00399009_00473643 NTN1B, NTN1.L, NTN1A, UNC-6, NTN1 coding downstream 209151 399009 ~ 473643 (-)
CI01000340_00320527_00323526 NA coding downstream 358784 320143 ~ 324010 (-)
CI01000340_00300171_00311362 CFAP52 coding downstream 370776 299895 ~ 312018 (-)
CI01000340_00197972_00296049 USP43A coding downstream 386745 197972 ~ 296049 (-)
CI01000340_00739436_00741531 DR1 coding upstream 53560 738405 ~ 741637 (-)
CI01000340_00750353_00755174 RDH8 coding upstream 65294 750139 ~ 755174 (-)
CI01000340_00764259_00771823 SCINLA coding upstream 78867 763712 ~ 773298 (-)
CI01000340_00787534_00791061 NA coding upstream 102327 786551 ~ 791409 (-)
CI01000340_00798980_00828835 NA coding upstream 114135 798980 ~ 828835 (-)
G485800 NA non-coding downstream 6398 574396 ~ 676396 (-)
G485805 NA non-coding downstream 183787 496677 ~ 499007 (-)
G485852 NA non-coding downstream 202015 479425 ~ 480779 (-)
G485796 NA non-coding downstream 331070 351356 ~ 351724 (-)
G485775 NA non-coding downstream 541345 141211 ~ 141449 (-)
G485888 NA non-coding upstream 3177 688022 ~ 689024 (-)
G485954 NA non-coding upstream 246756 931601 ~ 932122 (-)
G485962 NA non-coding upstream 257562 942407 ~ 943669 (-)
G485986 NA non-coding upstream 293343 978188 ~ 978858 (-)
G485947 NA non-coding upstream 301128 985973 ~ 1011769 (-)
G485786 NA other downstream 357078 325334 ~ 325716 (-)
CI01000340_00062787_00080635 NA other downstream 600699 62780 ~ 82095 (-)
G487884 NA other upstream 1210956 1895801 ~ 1902272 (-)
G488782 NA other upstream 3320960 4005805 ~ 4006448 (-)
G488862 NA other upstream 3822351 4507196 ~ 4518120 (-)
CI01000340_04598932_04627160 NA other upstream 3915375 4598714 ~ 4627447 (-)
G485951 NA non-coding upstream 248920 987226 ~ 988409 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_032039 NA non-coding NC_007117.7 CM002890.2 23951104 ~ 23955953 (+)