CI01000340_00710056_00726924


Basic Information

Item Value
gene id CI01000340_00710056_00726924
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 709830 ~ 727495 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_00710056_00726924.mRNA
CTATAAAGAGGATGTGATTGTCTTGCATTCAGGCTTAGCAAAAGAAAATATAACTGAACTGAAAACCCTGAAACAGATGACTCTGTTAAGATAGGGCCAGCGCAGCAGGTTCAAATGTTTAAATCCATGGCCATGTGCATGAAAATCAAATACAAACAATATAAAATCTTATTCTGTACTCACACACGTCCTTTACTCACTACTCAATCTTTTTTTCATTAGAGCCATGCACATGGGGTCATCCGCCTTGCTCTGGTGGGAGGACAGGACAAGGCTGTCTTACTTGTTTATATTTGGCATGATTTCATTGGAAATCAGCGATGGCCAAAGTCTCTCATTCTTCAACACTTCAATCATCTACTTGATCATATTTGTCTCAAAAACAAAAGACGCTCATCTACGCCCAAACATCATGTTTCTAGGCAACCAGTTACTGCCCTTGTCGGTGAGTTTGTACAGGGTTCTCCTTTTTCTGCCTTTCCATGAAGGCAATAACATGACGACGGCATTCATCTGCCGACACCTAATTAACCAGCTCTTGGCAAGTGACCCTGTGCATCATTATACGAGTGATCCCTGCAGTCCATTTACATCCTTGTCAATAAGCTTCCCCGCAAGCAGCTCGGAGGTCCTCAACTTGACATCTCAGATGACAAGAGCATCTGGTACATCAGTTTGTGACCTCAATACATACTGCATTTACCATCTTCTGAGGCTCCATGTCTTGTAAGGGATTTTATGGGGTTTAGACATTTAGGGTTAATTTGGTAATCAGCATTTGTAAACACAATTGACCTTCGATAGATAAAAGACTTACAAGCCAACCAAATTGCTACTCTGATAAGCGTTGTTGTTATCATTATCCGTCAAACTTTCTGAACTGTCTGTAACATACAAACCTCCTTTTTTGCCAAATTTCCAATATTATGATAAAGTGGTGTTGTTATTGTACATGTAATTCTGATACTTGGTATCCAGAGAGTTCCCAAAGCCGGTAATCTCAAAAAAAAAAGAAAAAAAAACATAATTTACCCATCTACAGAACGTGTTTTTTTTTTGTTTGTTTTTTTTGTGTTCTACCATGTTTCTATGTAGTGTTTCTACAGGCTGATACTAAAGCTTGTGATTTTGTGTGTGTGTGTGTTATTACGAACTGCATTTGAAGTAATTTATTCCAAAATCATAGGTACATCAGAGAGCGAACCGACTCATGACATAATTTTGTTTAATGGACATAGACAGAGTACCCACATAGGGGGTGTGGTTATGTAATCGTTGTTATGAGGTCAATACAATGACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_00710056_00726924.mRNA True 1301 mRNA 0.39 4 709830 727495

Neighbor

gene id symbol gene type direction distance location
CI01000340_00672283_00673853 GADD45AB, GADD45A coding upstream 35338 672283 ~ 674492 (+)
CI01000340_00630670_00634136 NA coding upstream 75599 630547 ~ 634231 (+)
CI01000340_00575085_00576868 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding upstream 132374 574460 ~ 577456 (+)
CI01000340_00559281_00560682 NA coding upstream 149148 558024 ~ 560682 (+)
CI01000340_00529527_00543895 NA coding upstream 165322 529527 ~ 544508 (+)
CI01000340_00883803_00902915 NA coding downstream 155906 883401 ~ 903402 (+)
CI01000340_00927319_01001912 TGFBR3 coding downstream 199824 927319 ~ 1001912 (+)
CI01000340_01065200_01074925 ZNF644B coding downstream 337154 1064649 ~ 1075153 (+)
CI01000340_01146151_01149216 BARHL2 coding downstream 417667 1145162 ~ 1149477 (+)
CI01000340_01322847_01325739 NA coding downstream 595352 1322847 ~ 1327211 (+)
G485618 NA non-coding upstream 26838 682703 ~ 682992 (+)
G485616 NA non-coding upstream 27612 681969 ~ 682218 (+)
G485600 NA non-coding upstream 28042 680323 ~ 681788 (+)
G485614 NA non-coding upstream 30451 679167 ~ 679379 (+)
G485564 NA non-coding upstream 137651 571707 ~ 572179 (+)
G485654 NA non-coding downstream 17776 745271 ~ 745493 (+)
G485659 NA non-coding downstream 30851 758346 ~ 758572 (+)
G485626 NA non-coding downstream 42403 769898 ~ 773660 (+)
G485671 NA non-coding downstream 69704 797199 ~ 797540 (+)
G485689 NA non-coding downstream 92674 820169 ~ 820897 (+)
CI01000340_00312480_00313262 NA other upstream 396585 312212 ~ 313534 (+)
G485427 NA other upstream 542196 163286 ~ 167634 (+)
G485373 NA other upstream 596061 106885 ~ 113769 (+)
CI01000340_02930635_02933799 LSM2 other downstream 2202596 2930635 ~ 2933935 (+)
G487133 NA other downstream 3246420 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 3671924 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 3936814 4659584 ~ 4669322 (+)
G489634 NA other downstream 5966726 6694221 ~ 6700788 (+)

Expression


Co-expression Network